| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_87504 |
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| Symbol | RPN4 |
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| ID | 4837664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 72301 |
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| End bp | 73687 |
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| Gene Length | 1387 bp |
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| Protein Length | 420 aa |
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| Translation table | 12 |
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| GC content | 40% |
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| IMG OID | 640388979 |
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| Product | hypothetical zinc finger protein |
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| Protein accession | XP_001382244 |
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| Protein GI | 126131438 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.482923 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.021979 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTTCGC AATCCAGCGT CACTGCACCG GATACCGTGT ATTCCTTGGA AGAACAAGTC
GATATCCTTA ATCTCGTAAA TCCTTCATCT ATTGAGGAAT ACTCGGAGCA TCTCTACAAG
ATAGCTAAGA TCTTGTACGA GGACAACCTT GACCAGAAGC TTCCCATATT GTTCAAGAAG
TTACAGGACA AGTACTATTC CTTGATGGAC CAACTTGACA ACTTTGTAGA CTCGGAAGAC
CCCATCCACT CCAAAGTGTA TGTAATCGTA GAGAGAAATT TCGACCTTTT CATAAAGATC
TCAACAAACC ACAAGAACGT CGAGCTTTCG ACAAGGACCA TTCGCTTTTT AACCAACATA
ATTATGAGCT TGAACTACTG GGAAGTTTAC AATCTCTTGT CCTGGAAGCC AGTTATATAT
CATTTCTTGT CTGTTATTCA ATTTGACATG AACGACTGCT ACAACAAATT CATCAGTGAC
TATGCCAAAT ACAACTACAA AAGATTGACC CAGCCACAGC CAATGTCGCA CAAGTCTAGA
AACCGAAGAA GACTTAAGAG AAGAAGAAAG TACAGTGGCA AGCTTGGATC TCCAGGGTCA
GAAAATGGAG TTAATGACGA TGGATCTCTT TCTCCAAACC CATACTACTA CGTAAGCTCC
GACACAACTG GCCGTGGCAG TTTGAGAGGT ATGAGTAAAG AAAGAAGAAA CAGAATGATG
AGAGCTGAAA ACAAGCGTAA TTCCCATCGG GCTATTAAGA AACCATCCAA TACCAAGCCT
TCCAACAAGT CGTCAAATTA TGATCCTGAT GTTGTTCATG AATGTCAATT GCCATCGCCA
GATGAACCTC ATAAGCTTTG CTTACGTCGT TTCTCAAGAA AATATGAATT AATAAGACAT
CAGGAAACTG TGCATTCTAA GAAGAAGAAA CTTTTCAAAT GCTTTGTTTG TGTAAAACAA
CACCCTGGAG TTGGCCCAAG AATATTTACC CGCCACGACA CCTTGGCCAA ACATATTCGT
GTTAACCACA AGATTTCTGG TAAGGAAGCC AAGGCAGAAG TTGCATATTC GAAGAAACAT
GCCGAGGTTG TTGAAGAAGG TGATATTACA GTCCATGTCG GACGCAGAAA GACCAAGGTT
GACTTTGAAT TGCGCGCTCA TATGGAGAAA CGAAAGGCAG AAAAGGATGA AATGGATGAT
TCCGGTTATT TGGTTCATAG CGATTTCGAC TCTGGAGACG AAGAAGTTAC ATTCAATACG
TAGTTTGCAT TCGGCCATCG AACATTCAAT TCTTTATTGA TTTTATAGTA TCATCAAACG
CATATATACA TGGAAGTATG ATTCAATGTT TTAATAGTTT ACATTTATAA TACAAATAGG
ACTACCA
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| Protein sequence | MSSQSSVTAP DTVYSLEEQV DILNLVNPSS IEEYSEHLYK IAKILYEDNL DQKLPILFKK
LQDKYYSLMD QLDNFVDSED PIHSKVYVIV ERNFDLFIKI STNHKNVELS TRTIRFLTNI
IMSLNYWEVY NLLSWKPVIY HFLSVIQFDM NDCYNKFISD YAKYNYKRLT QPQPMSHKSR
NRRRLKRRRK YSGKLGSPGS ENGVNDDGSL SPNPYYYVSS DTTGRGSLRG MSKERRNRMM
RAENKRNSHR AIKKPSNTKP SNKSSNYDPD VVHECQLPSP DEPHKLCLRR FSRKYELIRH
QETVHSKKKK LFKCFVCVKQ HPGVGPRIFT RHDTLAKHIR VNHKISGKEA KAEVAYSKKH
AEVVEEGDIT VHVGRRKTKV DFELRAHMEK RKAEKDEMDD SGYLVHSDFD SGDEEVTFNT
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