Gene PICST_87441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_87441 
Symbol 
ID4837572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp1550115 
End bp1550923 
Gene Length809 bp 
Protein Length248 aa 
Translation table12 
GC content42% 
IMG OID640388887 
Productpredicted protein 
Protein accessionXP_001382520 
Protein GI126131990 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.6448 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCTG AGGACGAACA AAGAGAAGAG GTGGAGGTCT TGCAATCAAT ATACCCAGAT 
GAGCTTGTTG TGATCAGCGA TAGCCATTAC AAGATCAGAA TCAAATTAGA CACTCCTAGC
ACTAGAGTTC ACACTTTGGC ACTTGATGTC CGGTATCCAG CTACTTATCC AGAAGTGATA
CCGGATTTGG ATGTAGAATT AGCAGAAGAT ATAGAAGAAG AGTACGACGA AGACGACGAA
GACGATGATG ATGACTACGA CAACTACCAA ATTGATGACG ACGATGAGGA TGAAGATACA
AAAAGAGTCA AAGAAGCCCT CAACATGTCG GAGACCATCG AATTCACAAA GAAGGACTTG
GAAATTTTAT ATGAAAAAAT CATAGAAGAA GCCAATAACC AAATTGGTAT ACCGATGGTA
TTTGCGCTTG CATCGCAATT GAAAGACGAC GCCGAACAAT TGTTTAAAGA CAATCTTGAT
AGCAAACAGG CCGAATACGA TCGCGAATTG CTTGAGCGAG AAAGGATCGA GCAGCAGAAA
TTCAATGGTA CTCCTGTGAC TAAGGAATCT TTCGCAGCCT GGAGAGATAA GTTCCGCAAG
GAGATGAACT ACGAAGAGAA ACAGAGACAG AAGTTCCGGG CTATGCACCA GGGCAAGCTC
ACAGGAAGAG AAATCTTTGA GAAGGGCTTG GCTCATGAAG AGGAGGTAGA TGATTTGGCT
GAAGGAGTGA AGAAGGTTGC TGTATAGACA AATTAGCATA GTATGACAGC TATATGATAT
GGTATATTGA TATGGATATA CCTTGCAAT
 
Protein sequence
MNAEDEQREE VEVLQSIYPD ELVVISDSHY KIRIKLDTPS TRVHTLALDV RYPATYPEVI 
PDLDVELAED IEEEYDEDDE DDDDDYDNYQ IDDDDEDEDT KRVKEALNMS ETIEFTKKDL
EILYEKIIEE ANNQIGIPMV FALASQLKDD AEQLFKDNLD SKQAEYDREL LERERIEQQK
FNGTPVTKES FAAWRDKFRK EMNYEEKQRQ KFRAMHQGKL TGREIFEKGL AHEEEVDDLA
EGVKKVAV