Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_87441 |
Symbol | |
ID | 4837572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 1550115 |
End bp | 1550923 |
Gene Length | 809 bp |
Protein Length | 248 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640388887 |
Product | predicted protein |
Protein accession | XP_001382520 |
Protein GI | 126131990 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.6448 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCTG AGGACGAACA AAGAGAAGAG GTGGAGGTCT TGCAATCAAT ATACCCAGAT GAGCTTGTTG TGATCAGCGA TAGCCATTAC AAGATCAGAA TCAAATTAGA CACTCCTAGC ACTAGAGTTC ACACTTTGGC ACTTGATGTC CGGTATCCAG CTACTTATCC AGAAGTGATA CCGGATTTGG ATGTAGAATT AGCAGAAGAT ATAGAAGAAG AGTACGACGA AGACGACGAA GACGATGATG ATGACTACGA CAACTACCAA ATTGATGACG ACGATGAGGA TGAAGATACA AAAAGAGTCA AAGAAGCCCT CAACATGTCG GAGACCATCG AATTCACAAA GAAGGACTTG GAAATTTTAT ATGAAAAAAT CATAGAAGAA GCCAATAACC AAATTGGTAT ACCGATGGTA TTTGCGCTTG CATCGCAATT GAAAGACGAC GCCGAACAAT TGTTTAAAGA CAATCTTGAT AGCAAACAGG CCGAATACGA TCGCGAATTG CTTGAGCGAG AAAGGATCGA GCAGCAGAAA TTCAATGGTA CTCCTGTGAC TAAGGAATCT TTCGCAGCCT GGAGAGATAA GTTCCGCAAG GAGATGAACT ACGAAGAGAA ACAGAGACAG AAGTTCCGGG CTATGCACCA GGGCAAGCTC ACAGGAAGAG AAATCTTTGA GAAGGGCTTG GCTCATGAAG AGGAGGTAGA TGATTTGGCT GAAGGAGTGA AGAAGGTTGC TGTATAGACA AATTAGCATA GTATGACAGC TATATGATAT GGTATATTGA TATGGATATA CCTTGCAAT
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Protein sequence | MNAEDEQREE VEVLQSIYPD ELVVISDSHY KIRIKLDTPS TRVHTLALDV RYPATYPEVI PDLDVELAED IEEEYDEDDE DDDDDYDNYQ IDDDDEDEDT KRVKEALNMS ETIEFTKKDL EILYEKIIEE ANNQIGIPMV FALASQLKDD AEQLFKDNLD SKQAEYDREL LERERIEQQK FNGTPVTKES FAAWRDKFRK EMNYEEKQRQ KFRAMHQGKL TGREIFEKGL AHEEEVDDLA EGVKKVAV
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