| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_87366 |
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| Symbol | PMA1 |
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| ID | 4837157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 1226328 |
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| End bp | 1229508 |
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| Gene Length | 3181 bp |
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| Protein Length | 897 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640388472 |
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| Product | plasma membrane H+-ATPase |
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| Protein accession | XP_001382452 |
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| Protein GI | 126131854 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01647] plasma-membrane proton-efflux P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.88988 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCAA CTGAACCTAC TAAAGAAAAG GTCGACAAGG TCGTCTCCGA CGACGAAGAT
GAAGACATTG ACCAATTAGT CTTAGATTTA CAATCCAACC CAGGACTTGG GGATGATGAC
GAAGAAGAGG AACAAGACCA GAGCACCTTC AAGGCTGTTC CTGAAGAATT GTTGCAAACC
GACCCTGCCA CCGGTCTTTC TGACGACGAA GTCCTCAAGA GAAGAAAGAA GTACGGTTTG
AACCAGATGG CCGAAGAAAA GGAAAACTTA GTTCTTAAGT TCGTCATGTT CTTCGTCGGT
CCTATTCAAT TCGTTATGGA AGCCGCTGCT ATCTTGGCTG CTGGTTTAGA AGATTGGGTC
GATTTCGGTG TTATCTGTGC CTTATTGTTG TTGAACGCTT TCGTTGGTTT CATCCAAGAA
TACCAAGCCG GTTCCATTGT CGATGAATTG AAGAAGACCT TGGCTAACAC TGCTTTGCTT
GTTAGAAACG GTCAATTGAT CGAAGTCCCA GCCTCTGAAG TCGTTCCAGG TGATATCATG
CAATTGGAAG ACGGTACCGT CATCCCAACC GATGGTAGAA TTGTTTCTGA AGATTGTCTT
TTGCAAGTCG ATCAATCCGC TATTACTGGT GAATCCTTGG CTGTTGACAA GAGACACGGT
GACTCCACCT ACTCTTCCTC CACTGTCAAG ACCGGTGAAG CTTTCATGGT TGTTACTGCT
ACTGGTGACT CTACTTTCGT CGGTAGAGCT GCTTCTTTGG TCAACAAGGC TTCTGCTGGT
ACCGGTCACT TCACTGAAGT GTTGAACGGT ATTGGTACGA CTTTGTTGGT TTTCGTTATT
CTTACTCTTT TGGTTGTCTG GGTTGCTTGT TTCTACAGAA CCGTCAGAAT TGTTCCTATC
TTGAGATACA CCTTGGCCAT CACCATTATT GGTGTTCCAG TCGGTTTGCC AGCTGTCGTC
ACCACTACCA TGGCTGTCGG TGCTGCTTAC CTTGCCAAGA AGCAAGCCAT TGTCCAAAAG
TTGTCTGCCA TTGAATCTCT TGCTGGTGTC GAAATCTTGT GTTCCGACAA GACCGGTACT
TTGACCAAGA ACAAGTTGTC TTTGCACGAC CCATACACTG TCGAAGGTGT TGAACCAGAT
GACTTGATGT TGACTGCTTG TTTGGCTGCC TCTAGAAAGA AGAAGGGTTT GGATGCTATT
GACAAGGCCT TCTTGAAGTC TTTGATTAAC TACCCAAGAG CCAAGGCTGC TTTGACTAAG
TACAAGGTTA TTGAATTCCA ACCTTTCGAC CCTGTTTCCA AGAAGGTTAC CGCCGTTGTT
GAATCGCCAG AAGGTGAAAG AATTGTCTGT GTCAAGGGTG CTCCATTATT CGTCTTGAAG
ACTGTTGAAG ATGACCACCC AATCCCTGAA GATATCCACG AAAACTACCA AAACACCGTT
GCTGAATTTG CTTCCAGAGG TTTCAGATCT TTGGGTGTTG CCAGAAAGAG AGGTGAAGGC
CACTGGGAAA TCTTGGGTAT TATGCCATGT ATGGATCCTC CAAGAGATGA CACTGCTGCT
ACTGTTAACG AAGCTAGAGG TTTAGGTTTG AGAGTTAAGA TGTTGACTGG TGATGCCGTC
GGTATTGCTA AGGAAACTTG TCGTCAATTA GGTTTAGGTA CTAACATTTA CGATGCCGAC
AGATTAGGTT TGTCCGGTGG TGGTGACATG GCCGGTTCTG AAATTGCTGA TTTCGTTGAA
AACGCTGATG GTTTCGCTGA AGTTTTCCCT CAACACAAGT ACAACGCCGT TGAAATCTTG
CAATCCAGAG GTTACTTGGT TGCCATGACT GGTGATGGTG TTAACGATGC TCCATCTTTG
AAGAAGGCTG ACACTGGTAT TGCCGTCGAA GGTGCCACCG ATGCTGCCCG TTCTGCTGCT
GATATTGTTT TCCTTGCTCC TGGTTTGTCT GCTATCATTG ATGCTTTGAA GACCTCCAGA
CAGATTTTCC ACAGAATGTA CTCTTATGTT GTCTACCGTA TTGCTTTGTC CTTGCACTTG
GAACTTTTCT TGGGTTTGTG GATTGCTATC TTGAACAGAT CTTTGAACAT TGACTTGGTT
GTCTTCATTG CTATTTTCGC TGATGTTGCT ACCTTGGCTA TTGCTTACGA CAATGCTCCA
TACGACCCTA AGCCTGTCAA GTGGAACACC CCAAGATTGT GGTTGATGTC TATTGTTTTG
GGTATAATCT TGGCTATCGG TACTTGGATC ACTTTGACTA CCATGTTCTT GCCAAAGGGT
GGTATTGTTC AAAACTTCGG TGGTATTGAC GGTATCTTGT TCTTGCAAAT TTCTTTGACT
GAGAACTGGT TGATTTTCGT CACTAGAGCT CAAGGTCCTT TCTGGTCTTC CATCCCATCG
TGGCAATTGG CTGGTGCCGT CTTCATTGTC GACATCATTG CTACTTGTTT CACCTTGTTC
GGCTGGTGGT CTCAAAACTG GACTGACATC GTCACCGTTG TCAGAACCTG GATCTTCTCT
TTCGGTGTCT TCTGTGTCAT GGGTGGTGCT TACTACTTGA TGTCTACTTC CCAAGCATTC
GACGACTTCG CCAACGGTAG ATCTACCAAG AAGGCTGAAC CAGACAGAAG ATCTTTCGAA
GATTTCTTGG TTTCCATGCA AAGAGTTTCC ACTCAACACG AAAAGTCCAC TTAGGTGTAC
TAGTGTTGAG GATAATTTAA TAGAATCTTA CATTTGTTGT GGGACTCTTG CTTTCATTTC
ATTTCTTCCC CGGATGACAT GAATGGTTGG TGGGTGTCTT ACTGCATTTC CTTCAAACCC
CATATTTTTA TTGAATCATG ATAAAAAAGT GAAAAATTAT TAAAAAAATC ACACAGTCAG
TATGATCATT ATTGGTGCTT TTTCGGTGCT CATCGTCATA AACATTATCT TGCTTGGTTC
GGTTAATTCT ACTGTCTACA TTAGCTTATT TGATCTGTTC AACTCTTCCC CAAGTTGAAC
TGATTAGAGC TTTGTACTAC ATTAATTTTC TTGTCTTGCA AGCATCATTT TAATAGTATT
CCCTTTTTTT ACTGTGATTT CCCCATTCCC CATTCCAAAG TCACATTCCC GTCATTTTTT
TGTTCTGCTA CAAAGTAGTT TCGTATTATA GTTTTTATTA ATAATAGATA ATAATATTTA
A
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| Protein sequence | MSATEPTKEK VDKVVSDDED EDIDQLVLDL QSNPGLGDDD EEEEQDQSTF KAVPEELLQT
DPATGLSDDE VLKRRKKYGL NQMAEEKENL VLKFVMFFVG PIQFVMEAAA ILAAGLEDWV
DFGVICALLL LNAFVGFIQE YQAGSIVDEL KKTLANTALL VRNGQLIEVP ASEVVPGDIM
QLEDGTVIPT DGRIVSEDCL LQVDQSAITG ESLAVDKRHG DSTYSSSTVK TGEAFMVVTA
TGDSTFVGRA ASLVNKASAG TGHFTEVLNG IGTTLLVFVI LTLLVVWVAC FYRTVRIVPI
LRYTLAITII GVPVGLPAVV TTTMAVGAAY LAKKQAIVQK LSAIESLAGV EILCSDKTGT
LTKNKLSLHD PYTVEGVEPD DLMLTACLAA SRKKKGLDAI DKAFLKSLIN YPRAKAALTK
YKVIEFQPFD PVSKKVTAVV ESPEGERIVC VKGAPLFVLK TVEDDHPIPE DIHENYQNTV
AEFASRGFRS LGVARKRGEG HWEILGIMPC MDPPRDDTAA TVNEARGLGL RVKMLTGDAV
GIAKETCRQL GLGTNIYDAD RLGLSGGGDM AGSEIADFVE NADGFAEVFP QHKYNAVEIL
QSRGYLVAMT GDGVNDAPSL KKADTGIAVE GATDAARSAA DIVFLAPGLS AIIDALKTSR
QIFHRMYSYV VYRIALSLHL ELFLGLWIAI LNRSLNIDLV VFIAIFADVA TLAIAYDNAP
YDPKPVKWNT PRLWLMSIVL GIILAIGTWI TLTTMFLPKG GIVQNFGGID GILFLQISLT
ENWLIFVTRA QGPFWSSIPS WQLAGAVFIV DIIATCFTLF GWWSQNWTDI VTVVRTWIFS
FGVFCVMGGA YYLMSTSQAF DDFANGRSTK KAEPDRRSFE DFLVSMQRVS TQHEKST
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