| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_87108 |
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| Symbol | AUT1 |
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| ID | 4836720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 598958 |
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| End bp | 601024 |
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| Gene Length | 2067 bp |
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| Protein Length | 635 aa |
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| Translation table | 12 |
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| GC content | 46% |
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| IMG OID | 640388035 |
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| Product | Arabinose-proton symporter (Arabinose transporter) |
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| Protein accession | XP_001382352 |
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| Protein GI | 126131654 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.132654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | CTACAAGTGA CAGTCAGTCG ATTAGACTTT GCATCCACTT GAGTTTGACA ATTGATATAT
TCCACTAGAG ACAATGAGTG CTGACGAAAA AGTCGCTGCT GCCGGCCAGG ACGGCTTGTT
TGAACACAAC AGTTCCACTT CGAGCATCGA GGACAAGAAG CCCTCCAAGA GCTCCGATGT
CGATTCCGTG AACTCGCAAT TAGTAGACAA CTCGGTAGAG GGCAACATCT TGTCCCAGTA
CACCGAAAGT CAGGTGATGC AGATGGGTAG AAGCTATGCC ACCAAGCACG GCTTGGACCC
AGAATTGTTC GCCAAGGCAG CTGCTGTTGC CAGAACTCCT CTTGGTTTCA ACTCCATGCC
CTTCTTGACA GAGGAAGAGA AGGTTGGTTT GAATGCCGAA GCCACTAATA AGTGGCACAT
TCCACCCAGA TTGATCGGGG TTATTGCCTT GGGTTCTATG GCCGCTGCTG TGCAGGGTAT
GGACGAATCG GTCATTAACG GTGCCAACTT GTTCTACCCC AAGGCTTTCG GAGTCGACAC
CATGCACAAT TCGGACTTGA TTGAAGGTTT GATCAATGGT GCTCCTTACC TTTGCTGTGG
TATTCTTTCC TGTTGGTTGT CTGACGCTTG TAACCGTCGT CTTGGTAGAA AATGGACCAT
TTTCTGGTGT TGTGTCATTT CTGCCATCAC CTGTGTCTGG CAAGGTCTTG TCAACAACTG
GTACCATTTG TTCATTGCTC GTTTCTTCCT TGGATTTGGT GTTGGTATCA AGTCCGCCAC
TGTTCCTGCC TACTCTGCCG AATGTACTCC TAAACACATC AGAGGTTCGT TAGTCATGTT
GTGGCAATTC TTCACAGCTG TTGGTATTAT GTTTGGTTAT GTTGCTTCCT TGGCTTTCTA
CAATGTCGGA GATAGAGGAA TCCATTACGG GTTGAACTGG AGATTGATGC TTGGTTCGGC
CGCTATTCCT GCTGTCATCA TCTTGTTCCA AATTCCTTTC GCTCCTGAAT CTCCACGTTG
GTTAATGGGT AAGGACAGAC ACCTTGAAGC CTTTGAGTCC TTGAAGCAAT TGAGATACGA
AGAACTTGCT GCTGCTCGTG ACTGTTTCTA CCAGTACGTC TTGTTAGCTG AAGAAGGTTC
TTACAAGATC CCAACCCTCA CCAGATTTAA GGAAATGTTC ACCAAGAGAA GAAACAGAAA
CGGTGCCATC GGTGCATTTA TTGTCATGTT CATGCAACAG TTCTGTGGTA TCAACGTCAT
TGCTTACTAC TCTTCGTCTA TCTTTGTCCA ATCTGGTTTC TCTCAAACTT CTGCTTTGAT
CGCTTCTTGG GGTTTCGGTA TGCTTAACTT CACCTTTGCC ATTCCTGCCT TCTTCACAAT
CGATCGTTTC GGTAGAAGAT CCTTATTGTT GGTTACCTTC CCCTTGATGG CTATTTTCTT
ATTGATTGCC GGTTTCGGTT TCTTGATAAA CGAAGAAACA AACTCCAAGG GAAGATTGGG
AATGATCATC ATCGGTATCT ATATGTTCAC CATCTGTTAC TCTTCCGGTG AAGGTCCAGT
TCCTTTCACC TACTCTGCCG AAGCCTTCCC ATTGTACATC AGAGACTTGG GTATGTCTTT
TGCTACTGCC ACCTGTTGGA CTTTCAACTT CATCTTGGCC TTCACCTGGA ACAGATTGGT
CAATGCATTC ACATCTACTG GTGCCTTCGG CTTCTACGCT GCTTGGAACA TCATTGGTTT
CTTCTTGGTC TTATGGTTCT TGCCAGAAAC CAAGGGCTTG ACCTTGGAAG AATTGGACGA
AGTCTTCGCC GTTTCCGCCG TCCAACACGC CAAGTACCAA ACCAAGAGTT TGATCAACTT
CATCCAAAGA TACGTTTTAC GTTCCAAGGT GGCTCCATTG CCTCCATTGT ACGACCACCA
GAGATTGGCT GTCACCAACC CAGAATGGAA CGACAAGCCA GAAGTCTCTT ATGTCGAGTA
GGCTCCTTGA TAACACATTC ATTTATTTCC TCTTTATAAT TAATAGTTAA CTTAGTTGTT
CAATTCTTCA CATCGCCTAG ATAGTAA
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| Protein sequence | MSADEKVAAA GQDGLFEHNS STSSIEDKKP SKSSDVDSVN SQLVDNSVEG NILSQYTESQ
VMQMGRSYAT KHGLDPELFA KAAAVARTPL GFNSMPFLTE EEKVGLNAEA TNKWHIPPRL
IGVIALGSMA AAVQGMDESV INGANLFYPK AFGVDTMHNS DLIEGLINGA PYLCCGILSC
WLSDACNRRL GRKWTIFWCC VISAITCVWQ GLVNNWYHLF IARFFLGFGV GIKSATVPAY
SAECTPKHIR GSLVMLWQFF TAVGIMFGYV ASLAFYNVGD RGIHYGLNWR LMLGSAAIPA
VIILFQIPFA PESPRWLMGK DRHLEAFESL KQLRYEELAA ARDCFYQYVL LAEEGSYKIP
TLTRFKEMFT KRRNRNGAIG AFIVMFMQQF CGINVIAYYS SSIFVQSGFS QTSALIASWG
FGMLNFTFAI PAFFTIDRFG RRSLLLVTFP LMAIFLLIAG FGFLINEETN SKGRLGMIII
GIYMFTICYS SGEGPVPFTY SAEAFPLYIR DLGMSFATAT CWTFNFILAF TWNRLVNAFT
STGAFGFYAA WNIIGFFLVL WFLPETKGLT LEELDEVFAV SAVQHAKYQT KSLINFIQRY
VLRSKVAPLP PLYDHQRLAV TNPEWNDKPE VSYVE
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