| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_86955 |
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| Symbol | UTP5 |
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| ID | 4851980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 3349342 |
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| End bp | 3351603 |
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| Gene Length | 2262 bp |
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| Protein Length | 664 aa |
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| Translation table | |
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| GC content | 42% |
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| IMG OID | 640393688 |
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| Product | part of small (ribosomal) subunit (SSU) processosome (contains U3 snoRNA) |
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| Protein accession | XP_001387210 |
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| Protein GI | 126276201 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00940306 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.367897 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AATACCCAAG AAAGTTCCCG GCATTGTCAA AATAGACTGA ATACACTTAC AAAAGATATA
GAAATAGCCA GTTTTTTTTT CTCCAGACTC GCATCATAGA AAACAGCCGA AAACGAATTC
TGCTTCATTT CAAATTTCCA TAATCTCATC TCAAAAAGTT ACAATACTTA ATCTACATTC
ATTCATAAGC CAGATTTCGC CCACAAAATG TCTTCAGTAA TAGTATCCAG ATTCGATCCC
TCCAGGACAT ACTTGGCTAC GGCTTCTGTA GCTTTGGATG CTCATCAGAT TTCTGTGCAA
TCAGTGCAGT GGTCTCAGAC GGCTGTGAAT ACTGTTTTTA AATTAGACAA GACTTCTCGA
GTCACCAACT TGAAGTGGAT CCCTTCTGGC AACGGTAACG ATTTCTACAT TGCCGTGACA
TTGACCAGGG GGTCTGTTCT TATTTATTCT CCTGAAAGCA ATGCTGTAGT CGCCGAATTG
GCCACTTCGA ACAACTCCGC AATTCTTGAC TTCTACTTTT CTCCACATAC CCATACCGCC
TGGTCGTGTG ATCTTGGAGG TTCAGTCCAG GAATGGGATT TGTCGAGTTT CCAATTGCTT
CAGCAGTTCA AAATTACAGA CTTTGTTGAA AATGTCGAGT CGATCAACAG AATAGCGAGC
GTCAGTTACG GAGGTAGTGC TCACTTGCTT GTAGGATCTC ATTCCATCTA CTTGGTAGAT
ATTGCAAGCA AAGCACTTGT AAAAACGTAC CCGGGTCATG TTGAGCCATT AAACAGTCTT
GTTCCGATTT CTAGCGATGC AGATTTGTTC CTCACTAGTG CCAAGGGAGA TCGTTTCATC
AACATGTACT CTGTGGAGCG AGCTGTAACC AAGACTGTGT TTGTTACTCA GGCTCCTGTA
GTAGATATTT TCGTAGGTAC AAAGGATAAC AAGTCTGTGT TGGTAGTCAT CAACGAGAAC
GGCAATATCG AATTGTTCAA CAACCCGTTG CTGACGGAGG CCCCTTCCCA ACCAGCTACA
CCATTGTCCA AGAAAAAAAG AAGACAGCAG TTGGTAAGTG TACAATCTCG TTCTCCACAG
GCAACTATCA GATTGTCGAG ACCTCAGTCT GAAATCAAAA GTCATCAAGA TGCAAACTTG
GTGATCGACT CAGTGACTAT CAGCGACAAT TCTGTAATTA TCTCGTGGTT GGAAAATTCC
AACATATCAT ACTTTGAAAC CCTCCAATGG TTGGATGAGT CTGGAAATTT CCCATTTGTC
TCTGATAGAA CCATTCACAA ATCTAAACCT GACTTGAAAG TCACCACCCA TTCCAGCCAT
GGACACGATG TTGCTTCTGC TAAACTCTAC AGTGAAGGAC ATGCTATCAT AAGTGATGGT
ACCAATGTCA GAGACTTGGA GTTGAATATT GAAGATGACA AAGAGGAAGA GACTTTGGCT
GACAAGTTGG AGAAGCTCGG AGGAGAACAA AAGGCTCCAG CAAAGTCTAT CAAGACCAAG
CACAAGTTAG GAGGAGATAA AACTGGTACA TTAACCATCA TCTTGTCTCA ATCGTTGAGA
AACAATGACC ACTCGTTATT GGAGACAGTG TTAAGCAACC GTGATCCAGT TGTTATTCAG
AATACCATCT CCAAGTTGGA CCCATCTTTA GCTGTAGTTC TTTTAGATAG ACTCAGTGAA
AGATTCCAAC GTCAATCATC CAGATTCGAC CAATTGAACT ACTGGTTGAA GTGGATAGTT
ATTATCCACG GCGCAGTGAT TTCCTCATTA CCGAATCTTA GCATTAAATT ATCAGGCTTA
CATTCAATGT TGACCAAAAA AGCCGACACC TTGCCTCGTC TCTTGGAATT GCAAGGAAGA
TTGCATATGT TGTACGACCA GAACGATTTG CGTAAGGAAA TCATGTCTGA AGAGCTTCGT
GATGAAGACG AGGAAATTGA TAGTGACATC GAATACATTG AGGAAATTGA CGATGCCGAA
GTATTGGGAC TTTTGAACGA TGACGACTTT GACATGGTTG AAGGCAGAGA CGATTACGTG
GATAGTGACG AAGATGATGA CGAAGAAGTA GATGATGATG AGGAGGATGA TGAGGAAGAA
GAAGAAGAAG GTATCAAATC TGCTCTTGAT TTGGATGACG AGAATGCAAG TGATGTCGAA
ATTGGCGTCA ATAACAACGA TAGAATGGAG GATGATGAAT AGGTTCCCTG TAATATACAT
AGACTACATA GCATGTACCA TAGACTTATA AACAGTCACT TG
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| Protein sequence | MSSVIVSRFD PSRTYLATAS VALDAHQISV QSVQWSQTAV NTVFKLDKTS RVTNLKWIPS
GNGNDFYIAV TLTRGSVLIY SPESNAVVAE LATSNNSAIL DFYFSPHTHT AWSCDLGGSV
QEWDLSSFQL LQQFKITDFV ENVESINRIA SVSYGGSAHL LVGSHSIYLV DIASKALVKT
YPGHVEPLNS LVPISSDADL FLTSAKGDRF INMYSVERAV TKTVFVTQAP VVDIFVGTKD
NKSVLVVINE NGNIELFNNP LLTEAPSQPA TPLSKKKRRQ QLVSVQSRSP QATIRLSRPQ
SEIKSHQDAN LVIDSVTISD NSVIISWLEN SNISYFETLQ WLDESGNFPF VSDRTIHKSK
PDLKVTTHSS HGHDVASAKL YSEGHAIISD GTNVRDLELN IEDDKEEETL ADKLEKLGGE
QKAPAKSIKT KHKLGGDKTG TLTIILSQSL RNNDHSLLET VLSNRDPVVI QNTISKLDPS
LAVVLLDRLS ERFQRQSSRF DQLNYWLKWI VIIHGAVISS LPNLSIKLSG LHSMLTKKAD
TLPRLLELQG RLHMLYDQND LRKEIMSEEL RDEDEEIDSD IEYIEEIDDA EVLGLLNDDD
FDMVEGRDDY VDSDEDDDEE VDDDEEDDEE EEEEGIKSAL DLDDENASDV EIGVNNNDRM
EDDE
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