| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_86938 |
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| Symbol | GSC2 |
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| ID | 4851590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 2230753 |
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| End bp | 2235675 |
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| Gene Length | 4923 bp |
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| Protein Length | 1640 aa |
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| Translation table | |
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| GC content | 38% |
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| IMG OID | 640393298 |
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| Product | 1,3-beta-glucan synthase component |
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| Protein accession | XP_001386777 |
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| Protein GI | 126274958 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.233696 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.145617 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGATT ATCTAATGCG ATTGCTTGAT TCGCGAGCTT GTCGTATGGG TCCAGCAAAG
GCGCTTCGAA CCATCCACGC TGATTACATT GGTGGAATCA ATGCTAATTT CAAAAAGTGG
TATTTTGCTG CTAGTTTGGA TATTGATGAT ACCTTTGGCT TGGCCAATGT AAATTCCAAT
GGAAAGATAA AAAAGTCTAA GAATGAGTAT GTGTCATCAT TGGAGCAGTC TGAATCACAA
TGGTGTTTGA ACATGAAGTC ACTATCACCT ACAAATTGTG TGATTCAAGT TGCATTGTAT
ATCTTGTGTT GGGGTGAAGC CAACAACATA CGGTTCATGC CAGAATGTTT GTGCTTTATA
TTCAAGTGTT GCAATGATTA CTACTACTCA CTTGATCCGG CGGAACCAAT TCGGAATGCA
ACTCCAAGTT TCTTGGACCA TGCTATTACG CCATTGTACA ACTTCTATCG AGATCAAGCT
TATGTGAAAG TGGAAGGAAG GTATTATCAC AAAGACAAGG ACCACAATTC TATTATAGGA
TATGATGACA TGAACCAACT TTTTTGGTAT TGTAATGGTC TTCAACGAAT TTTCTTGAAG
GATGGCAAAA CCAAACTAAT GTCTCTACCA GCTTACGAAA GGTATGAACA TTTGAATGAG
GTTGCATGGG AGAAGGCATT TTTCAAGACC TTCATTGAAA GGAGAAGTTG GTTTCATGTG
TTCTCAAATT TCAACAGAAT TTGGATAATT CATGTCTCAG TTTTTTGGTA TTATACTCTG
TTCAACTCAC CAACATTGTA TACAAAGGAC TACCTGCAGC AACATGATAA CCAACCTACA
AAGATGGCCA CTTTATCCGT GATGTCTCTA GCTGGGGTTA TTGCGTGTGC CATTGATTTA
ATCAGTACTG TGTTGGAGTT CTCATACGTT CCAAGAAAAT GGGCAGGAGC CCAACCATTA
TCAAAGAGAT TATTCATATT ACTTTTCATG CTAATTGCCA ATCTTGCTCC GTCGGTATAT
TTGTATTTAA CTTATCCTCT AAATCGTCAA ACAAATGTCG GGCTTGGGAT TGCAACAGCC
CAGTTTTTGT TTTCCCTTTT CGTTGTGATA TACTTGTCAG TTGCTCCGTT AGCACATATC
GGTGATTCCT ATCCCAAATC TCGAGGCAGA CGATATTTAC CAACTCAATA TTTTGCAGCC
AGCTTCTACT CGTTGAAAGG TACTGACAAG GTTGCATCTT ATGGCTTGTG GTTCGCTATT
TTTGTTTCAA AGTTTATCGA ATCATATTTC TTTTTAACTT TGTCATTAAG AGATCCGATC
AGGGAATTAA GTATTATGAA GATGACTAGA TGTTCCGGAG AAGTATTGAT TGGAAACTGG
TTATGTATGC GTCATACAAT TGTTGTCTTG CTGTTGACAT ACTTGACAGA TTTGGTTTTA
TTTTTCCTTG ATACCTATCT ATGGTATATT GTCTGGAATA CAATCTATTC TGTATGTCGT
TCATTCTATA TTGGTGCTTC CATATGGACA CCATGGCGGA ATATCTTTTC GAGATTACCA
AAAAGAATTT TCTCGAAAAT AATTGCTTCT CCAGCTGATA GGACTATAAA GGCAAAATTT
CTAGTCTCAC AAGTATGGAA TTCCATAATA ATCTCGATGT ACCGTGAGCA TCTTTTGTCG
TTAGAGCATG TTCAAAAGTT GTTATACAAA CAGGTTTCTG TATCTGGAAT CGAAGGAGAT
ACTGTTCTAA AAGAGCCAAC CTTTTTTGTT TCTCAAGAGG ATCAATCATT AAAATCAGCC
TTGTTTTACG AGCAGTCTGA AGCCCAAAGG AGAATCACAT TCTTTGCCCA GTCATTATCA
ACTCCGATGC CTGAAGTAAA TCCTATTAAC TCCATGCCAA CTTTCAGTGT ACTTATTCCT
CATTATAGTG AGAAGATAAC GCTATCTCTT AGAGAAATAA TAAGGGAGGA GGAGCAGTAC
TCTCACGTCA CAATGTTAGA GTACTTGAAA CTGTTACATC CGTTGGAATG GTCTTGTTTT
GTGCGCGATA CCAAATTGCT AGCAGAAGAA TTTGACACTG AGACATCATC GCCTACTTTC
GATAATGAGA CGAAAGATGA TTTACCTTAT TACTCGGTTG GATTCAAAGT AGCAACACCT
GAATATATCC TTAGGACAAG AATATGGGCA TCCTTGAGGT CGCAAACATT GTATCGTACA
ATTTCAGGCT TTATGAATTA TTCCAGGGCA ATCAAACTAT CATTTGATGT TGAAAACCTT
AGTGACAAAG AATACAAAGA TGAGAACGGG AAATTAGAAG AAGCATCTGT CATGGCTCTT
CGAAAGTTCA GAATTGTTGC TTCAATGCAG CGCTTGAAGA ATTTTTCTCC TGAAGAAAGA
GAAAATAAGG AATTCCTTCT TCGAACTTAT CCTGAACTTC AGATATCTTA TTTGGATGAG
GAAATTGACA TTGATACTGG CGAATCTACT TTCTATTCGA GTTTGATTGA TGGGAGTTGC
GCTTTGTTGG AAAATGGGGA AAGAGTTCCG AAGTATAGAA TAAAGCTATC AGGAAATCCT
ATCTTAGGAG ATGGAAAATC TGACAATCAA AACAACTCAT TGATCTTCTG CAGAGGAGAG
TATATTCAAC TTATTGATGC CAACCAAGAT AATTATCTTG AGGAGTGTCT CAAAATCAGA
AGTGTGTTAG CTGAATTCGA AGAAAATTCT GCCCCAATTG ACCCTTATTC AAATGAATTA
AAGGATAGTG ATCATTCACA TCCAGTTGCT ATAATAGGAA CAAGAGAATA CATATTCTCA
GAAAATATCG GAATACTAGG TGACGTAGCT GCTGGAAAGG AGCAAACATT TGGAACCTTG
TTTGCTCGAA CTTTGCAATA CCTAGGAGGA AAACTACATT ATGGCCATCC GGACTTTTTG
AATGGTATTT TCATGACAAC AAGGGGAGGG GTCTCTAAAG CACAAAAGGG TCTTCATTTG
AATGAGGATA TTTATGCTGG AATGAATGCA ATGGTGAGAG GTGGTAGAAT AAAGCACTGT
GAATACATGC AGTGTGGAAA GGGAAGAGAC CTTGGCTTTG GATCTATTCT TAACTTCACG
ACCAAAATCG GTGCCGGCAT GGGTGAGCAG ATGCTCTCTC GAGAATATTT CTATCTAAGT
ACTCAGCTTC CGTTAGATCG ATTTTTGTCC TTCTATTACG CTCATCCTGG ATTCCACCTC
AATAATGTGT TTATTATTTT ATCGATCAAG TTGTTCTTAT TGGTAGGAGT AAACTTAGCT
GCATTGACAA ATGAGACAAC AATTTGTGAG TATGATAGGT TTCGCCCTAT CACTGACCCA
CGGAGACCGA TTGGTTGTTA TAATCTAATT CCTGTTGTTC AATGGCTTGA GCGCTGTATT
TTTTCCATTT TCATTGTTTT CTTGATTTCT TTCTTGCCTT TGGCTGTTCA GGAGTTGACT
GAGAGAGGCT TTTATTGTGC TCTAACACGT CTCAGTAAAC ATTTTGCGTC TTTCTCTCCA
CTTTTCGAAG TTTTCGTTTG TCGTATCTAC GCGCAATCCT TGTGCAGCGA TATCTCCATC
GGCGGAGCTC GATATATCGC TACTGGACGG GGGTTTGCAA CAATTCGAGT GCCATTTTCT
GCATTGTACT CTCGATTTGC TTCTCAAAGC TTGTATTTTG GAGCAATTTC AGGCTTGTTA
ATCTTGTATA CCTCTATTAC AATGTGGAAA CTTCCATTGC TTTATTTTTG GGTTACCGTG
ATAGGATTAT TGATTTGTCC CTGTTTGTAC AATCCCAACC AATTTTCATT GACAGATTTC
TTTTTGGATT ACGGCGAATT CTTAAGGTGG TTGAGTAGAG GAAATAGCAG ATCGAGCATG
TCATCATGGA TAAATTACAC TAGGCTAGGA AGGAGTAGAA TTGTTGGTAT TAAAAACCGA
AATTTTAACA CTCGAGAAGA TATCAAAGAA ATCAACTCAA TAAGACCTTC CAGGGTGAGG
TTAATATTGA CTGACTCCAT TTTTGAATTG GCCGTTATCT TGGTTGTTGG ATGCGCCTAT
CTATTCTCAA ATTCACAGAA TGATACCAAA GGAACGAATC CTGTTAACAG CATATTTAGA
ATCTTGCTAA TCACCCTTGC ACCAATCATG GTCAATATGG CAATCCTATT AATTTTTTTT
GTGGTTTCTA TTCTTACTGG GCCAGTTTTG ACATTGGTAT TTAGGTGGTA TCCCACTCTT
ATCGCCACAG TTGTTCATTC CCTTTCCGTG TTAAATTATG TTTTCTTCTT CGAATTGCTT
TGGTTATTCC AGAATTGGAA CTTTTCTAGA ACTATACTTG GCTTGACCTT GTCAGTTCTT
ATCCAGACTT GGTTTTTACA ATTAATAAGT GCGACCTTAA TTTCTAGAGA ATTCCGTCAT
GATCATTCCA ACAAATCATG GTGGTCTGGA AGTTGGTTTA CTTCTGGATT AGGATGGAAT
ATTCTATCAC AACCTTTCAG AGAATTTGTT TGTAAGACTA CTGAGCTATC TTATTTTGTG
GGGGACTTGG TTATAGGGCA CATTATCCTA TTTGCGCAAA TACCTGTGCT TCTTATTCCT
TATGCCGATA AATGGCATTC GCTCATGTTG TTCTGGTTAA AACCTGGACG CCAGGTTCGT
CCAGGAGTAT TCACAAAGAA ACAAAGAAGA CGCAGAAGAA ACCGGGCATT ATTGAATGGG
TTCTTATTCA TTGCTTCTGT GACCTTATTT CTCTCGCTTT TTATACTACC ATTGATTGCT
ACGAGATGGT TTGATTTTGA TTTTGAAAGG TATCTTCCAG AACTTTTGCG TCCATTAGTT
CAACCATTCG CTATCGTTAA TAGCAGGAAA GGATTACACA AGGGGTTAAT AAAGCAGTAT
TGA
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| Protein sequence | MFDYLMRLLD SRACRMGPAK ALRTIHADYI GGINANFKKW YFAASLDIDD TFGLANVNSN
GKIKKSKNEY VSSLEQSESQ WCLNMKSLSP TNCVIQVALY ILCWGEANNI RFMPECLCFI
FKCCNDYYYS LDPAEPIRNA TPSFLDHAIT PLYNFYRDQA YVKVEGRYYH KDKDHNSIIG
YDDMNQLFWY CNGLQRIFLK DGKTKLMSLP AYERYEHLNE VAWEKAFFKT FIERRSWFHV
FSNFNRIWII HVSVFWYYTL FNSPTLYTKD YLQQHDNQPT KMATLSVMSL AGVIACAIDL
ISTVLEFSYV PRKWAGAQPL SKRLFILLFM LIANLAPSVY LYLTYPLNRQ TNVGLGIATA
QFLFSLFVVI YLSVAPLAHI GDSYPKSRGR RYLPTQYFAA SFYSLKGTDK VASYGLWFAI
FVSKFIESYF FLTLSLRDPI RELSIMKMTR CSGEVLIGNW LCMRHTIVVL LLTYLTDLVL
FFLDTYLWYI VWNTIYSVCR SFYIGASIWT PWRNIFSRLP KRIFSKIIAS PADRTIKAKF
LVSQVWNSII ISMYREHLLS LEHVQKLLYK QVSVSGIEGD TVLKEPTFFV SQEDQSLKSA
LFYEQSEAQR RITFFAQSLS TPMPEVNPIN SMPTFSVLIP HYSEKITLSL REIIREEEQY
SHVTMLEYLK LLHPLEWSCF VRDTKLLAEE FDTETSSPTF DNETKDDLPY YSVGFKVATP
EYILRTRIWA SLRSQTLYRT ISGFMNYSRA IKLSFDVENL SDKEYKDENG KLEEASVMAL
RKFRIVASMQ RLKNFSPEER ENKEFLLRTY PELQISYLDE EIDIDTGEST FYSSLIDGSC
ALLENGERVP KYRIKLSGNP ILGDGKSDNQ NNSLIFCRGE YIQLIDANQD NYLEECLKIR
SVLAEFEENS APIDPYSNEL KDSDHSHPVA IIGTREYIFS ENIGILGDVA AGKEQTFGTL
FARTLQYLGG KLHYGHPDFL NGIFMTTRGG VSKAQKGLHL NEDIYAGMNA MVRGGRIKHC
EYMQCGKGRD LGFGSILNFT TKIGAGMGEQ MLSREYFYLS TQLPLDRFLS FYYAHPGFHL
NNVFIILSIK LFLLVGVNLA ALTNETTICE YDRFRPITDP RRPIGCYNLI PVVQWLERCI
FSIFIVFLIS FLPLAVQELT ERGFYCALTR LSKHFASFSP LFEVFVCRIY AQSLCSDISI
GGARYIATGR GFATIRVPFS ALYSRFASQS LYFGAISGLL ILYTSITMWK LPLLYFWVTV
IGLLICPCLY NPNQFSLTDF FLDYGEFLRW LSRGNSRSSM SSWINYTRLG RSRIVGIKNR
NFNTREDIKE INSIRPSRVR LILTDSIFEL AVILVVGCAY LFSNSQNDTK GTNPVNSIFR
ILLITLAPIM VNMAILLIFF VVSILTGPVL TLVFRWYPTL IATVVHSLSV LNYVFFFELL
WLFQNWNFSR TILGLTLSVL IQTWFLQLIS ATLISREFRH DHSNKSWWSG SWFTSGLGWN
ILSQPFREFV CKTTELSYFV GDLVIGHIIL FAQIPVLLIP YADKWHSLML FWLKPGRQVR
PGVFTKKQRR RRRNRALLNG FLFIASVTLF LSLFILPLIA TRWFDFDFER YLPELLRPLV
QPFAIVNSRK GLHKGLIKQY
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