| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_86778 |
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| Symbol | COQ1 |
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| ID | 4851579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 2199002 |
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| End bp | 2200448 |
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| Gene Length | 1447 bp |
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| Protein Length | 465 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | 640393287 |
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| Product | hexaprenyl pyrophosphate synthetase, mitochondrial precursor (HPS) |
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| Protein accession | XP_001386769 |
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| Protein GI | 126274920 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.337551 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.144508 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTCTTT CTCGGAGCTC GTCTACTTCG GCCAGCACGT TCAAAACGGC GGTAGAGACG
GCCGAGAAGC TTGTACAGCC CCAGCTGAGC CTGACTTTCC ACGATCCGTT CTCGATAGTC
AGCCACGAAA TGTCCAACTT AGCCAAGTCT ATAGCAAATT TAATTGGCTC GGGTCATCCA
ACACTCAATC GTGTCAGTTC GTACTACTTT GAAGCCGAGG GCAAGAACGT CAGGCCGTTG
ATCGTGTTGC TCTTGTCTAA GTCTCTCGCA GCGATCCCAA TAGAACAGCG CAACAGAATA
AAGATTGACA CCTATGATGT CACCAACCAG CCCCATTACA ACGGAACGCC TACGGAGACA
GTAGTAGCTG GTAACTCTGT AGACGACTCC ATTTCGCCAT TGGCAATTTT GCACGGAATC
AATCCAAGAG TTATCTTGGA TCCGTTATCG AAGCCTATGG ACAAGTTGCC TGAGTTCGAT
GCAATGAACG GAATATTGCC CAAGCAACGG CGTTTGGCTG AAATCGTTGA GATGATCCAT
ACAGCATCGC TCTTGCACGA CGATGTTATC GACTTGTCGG ACTCCAGACG TGGAAGACCC
AGCGGAAACA TCGCATTCAC TAATAAGATG GCTGTGTTGG CTGGCGACTT CTTGTTGGGC
AGAGCGTCTG TAGCTATTGC CCGTTTGAGA AACCCTGAGG TCATTGAGCT CTTGTCGACT
ACCATTGCGA ACTTAGTCGA AGGAGAGTTC ATGCAGTTGA AAAACACTGT GATGAGCAAC
GATTCTCAAA GTATCGTAAA TGATGGAGAG AAAAAAGTCA TACCAGAGCC AACGGGAAAA
GTGCCCACCA AACAGCACGA ATACTCAGTA TCGACTCCAG CCGAAGTAGA CCACATCACT
AACGTCGATG CTGCATTCGA ATACTACTTG CATAAGACAT ACTTGAAGAC AGCTTCGTTA
ATGTCGAAGC TGTCGCGTGC TGCTGCCGTT TTAAGCGGAG CCCACGACGA CATCATTGAG
AACTGTTACG AGTTCGGTCG TAACTTGGGT TTGTGTTTCC AGATCGTGGA CGACATGCTA
GACTACACTG CTAGTGATGC AACTTTCGGA AAGCCAAGTC AGGCTGACTT GAAGTTAGGG
TTGGCTACGG CTCCCATCCT CTTTGCCTGG AAGGAACAGC CCGAGTTGGG AGAGTTGATT
GCCAGAAAGT TTAGCGAGCC TGGAGATGTC GAAATCGCCA GAAATGCCGT CAAAAAGTAC
CTGGGCTTGG AAAAGACTAG AGAAATGGCT CACGAATATT GCTACAAAGC GTTGCAGAAC
TTGCGTGTTT TGCCAGAATC AGATGCCAGG AGCGCTTTGG AGTTCTTGAC CAACTCGGTG
CTAACTAGAA ACAAGTGAAC CACTGGCGAT TCATAGAGCT ATACTTCTAC ATCTATTCTA
AATAACC
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| Protein sequence | MALSRSSSTS ASTFKTAVET AEKLVQPQLS LTFHDPFSIV SHEMSNLAKS IANLIGSGHP
TLNRVSSYYF EAEGKNVRPL IVLLLSKSLA AIPIEQRNRI KIDTYDVTNQ PHYNGTPTET
VVAGNSVDDS ISPLAILHGI NPRVILDPLS KPMDKLPEFD AMNGILPKQR RLAEIVEMIH
TASLLHDDVI DLSDSRRGRP SGNIAFTNKM AVLAGDFLLG RASVAIARLR NPEVIELLST
TIANLVEGEF MQLKNTVMSN DSQSIVNDGE KKVIPEPTGK VPTKQHEYSV STPAEVDHIT
NVDAAFEYYL HKTYLKTASL MSKLSRAAAV LSGAHDDIIE NCYEFGRNLG LCFQIVDDML
DYTASDATFG KPSQADLKLG LATAPILFAW KEQPELGELI ARKFSEPGDV EIARNAVKKY
LGLEKTREMA HEYCYKALQN LRVLPESDAR SALEFLTNSV LTRNK
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