| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_85807 |
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| Symbol | YBN5 |
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| ID | 4851216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 1222134 |
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| End bp | 1223371 |
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| Gene Length | 1238 bp |
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| Protein Length | 396 aa |
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| Translation table | |
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| GC content | 43% |
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| IMG OID | 640392924 |
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| Product | Predicted GTP-binding protein (ODN superfamily) |
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| Protein accession | XP_001387879 |
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| Protein GI | 126274202 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0012] Predicted GTPase, probable translation factor |
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| TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0128602 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACCAA AGAAGAAGAA CGTGCAAGAA AAGCCTATTT TGTTAGGTAG ACCAGGTAAC
AATTTGAAAT CTGGTATTGT CGGACTTGCC AATGTGGGTA AGTCCACTTT TTTCCAGGCC
ATTACCAGAT GTCCATTAGG TAACCCTGCA AACTACCCAT TTGCTACCAT TGAGCCCGAA
GAAGCCAGAG TCATTGTGCC ATCGCCCAGA TTCGAAAAGT TATGTGAATT GTACAAGCCA
AAGAGTGAAG TTCCAGCCTT CATGACTATT TACGATATTG CTGGTTTGAC TAAGGGAGCC
CATGCTGGTG AAGGTTTGGG TAACAATTTC TTAGCCAACA TCAGAGCTGT CGATGCCATT
TTCCAGGTTG TTCGTGCCTT TGAAGACTCT GAGATTATTC ACATCAACGA CGAAGTCAAC
CCATACGCTG ACTTGGAAAT CATCAAGGAC GAGTTGAGAT TGAAGGATAT CGAGTTCGCT
ACCAAGCACT TAGAAGGAAT TGAAAAAATC ACCAAGAGAG GTGGACAATC ACTTGAAGTT
AAGAACAAAA AAGAAGAAGC CGAATTCGTC AAGAGAATCA TTCTGTTGTT GGAAGAAGGT
AAAAGAATCG CCAACCAGGT CTGGACTGCT AAGGAAGTCG AAACTATCAA CTCCATGTTC
TTGTTAACTG CCAAGCCTTG TATCTACTTG ATCAACTTGT CAGAAAGAGA CTATGTCAGA
AAGAAGAACA AGCACTTGTT GAAGATCAAG GAATGGGTTG ATGCCAACTC TCCAGGTGAT
CTCATCATCC CAGTTTCTGT TTCCTTGGAA GAGAAGTTGG CTGGTATGGG TTCTGACGAA
GAAAGAGATG CCTACTGTAA GGAAATCGGT GCCACTTCTG CATTGCCAAA GATCATTGTG
GCCATGAGAC AGAAATTGGA CTTGATCTCG TTCTTCACCG GAGGTCCAGA TGAAGTCAGA
GAATGGACCA TCAGAAGATG GTACACTGCT CCACAAGCTG CTGGTACTAT CCACACTGAT
TTGGAAAGAA CCTTCATCTT GGCCCAAGTC ATAAAATACG ATGACTTGGT GGAATACGGA
GATGAAGTCG CTGTCAAGGC TGCTGGTAAG TTGTTACAAA AGGGTAAGGA CTACTACGTT
GAAGATGGTG ACATCATCTT TGTCAAGGCA GCCGAAGGTA AGGCTCGTTA AGTGTATTTA
GTATTGTCAC GAACATATAA GCACATGAAC ATATAAAA
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| Protein sequence | MPPKKKNVQE KPILLGRPGN NLKSGIVGLA NVGKSTFFQA ITRCPLGNPA NYPFATIEPE
EARVIVPSPR FEKLCELYKP KSEVPAFMTI YDIAGLTKGA HAGEGLGNNF LANIRAVDAI
FQVVRAFEDS EIIHINDEVN PYADLEIIKD ELRLKDIEFA TKHLEGIEKI TKRGGQSLEV
KNKKEEAEFV KRIILLLEEG KRIANQVWTA KEVETINSMF LLTAKPCIYL INLSERDYVR
KKNKHLLKIK EWVDANSPGD LIIPVSVSLE EKLAGMGSDE ERDAYCKEIG ATSALPKIIV
AMRQKLDLIS FFTGGPDEVR EWTIRRWYTA PQAAGTIHTD LERTFILAQV IKYDDLVEYG
DEVAVKAAGK LLQKGKDYYV EDGDIIFVKA AEGKAR
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