Gene PICST_85048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_85048 
Symbol 
ID4840780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp251217 
End bp254352 
Gene Length3136 bp 
Protein Length1044 aa 
Translation table12 
GC content39% 
IMG OID640392095 
Productpredicted protein 
Protein accessionXP_001386070 
Protein GI150866456 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1196] Chromosome segregation ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CATGAGTCGT GCTGAAGTTG ACTTGCAGAA TAGCGTCAAG AAGGCGTGCA ACAATGATGA 
AGTTCCTCCA AAAAGAAAGC ATGTCAGAGC TTGTATTGTC TACACTTGGG ACCACAAGAA
CTCAAGGGCA TTCTGGAATG CTGTAAAGAT TCAGCCATTG CAAAGTGACG AAGTTCAATT
ATTCAAGGCA TTGATAATGA TTCACAAAGT TTTACAGGAG GGCCATCCAA ATACTTTGAA
AGACGCCTAT CGTAACAGGG ACTTTCTTTC TTCCTTGTCC TCGGTATTTC CATCCCATGG
AACAGCTTAT GGGAGATTGA TCAATCAGTA CGATAGATTC ATACTCCAAA AATTGGATTT
CCATCGTAAC AACCCCGGCT TCAATGGGAT TTTTGAATAT GAAGAGTATA TTTCGTTGAG
AGCTGTTAAT GATCCCAACG AAGGATTTGA GTCTATTTTC CAATTGATGG ACTTACAGGA
TCTGATCAAC GATTTGCAGA AGTTGATTTT TGCCACTATT AACCAAACCC CAAACAATTT
GTGCAAGGTA AGTGCATTGG TTCCTTTGAT TTCGGAATCT TATGGTATTT ACAAATTTTG
TACCTCCATG TTGAGAGCCA TGTACCAGCA ATTGGGTGAT GATGAAGCAT TGAAGATGCT
CTTCGAGAGA TTCGATTCGC AACATTTTGT TCTTAGAGAC TTTTATACAG ATTGTCATGC
TATCAAATTT TTGACCAGTT TGATCACGAT TCCACGGTTA TCAAACAACC CACCTAACTT
GCAAGTGACA GATGAGGGAA CACCAATTTC AAGACCAAGG TCTGTAAGCA CTGAAAACAC
ACCTCAAATT TCGTCTCAGC CAACCTCAAA TTTTGAAGCC CCACCAAATC CTCCACCAGC
AGTAGATCAG CTTTTTAACC AGCAAACTGG AATCTTATTC CAACAACAAC AGGAGCAAGA
AAGAATTCAA CGTGATTTGG AAATGCAGCG TCTACAACAA CTTGAACAGC AACAGTTGCA
ACAGCGTCTC TTCGAAGAGC AGCAACGTGA ACAAGAGAAA CGATTTGTTC AGGAACAGCA
GGCGTTGCAA CAACAACAAA GCCAACAACA GCAGACTCGA GTATCTGAAC TTGAACATGA
TTTGTTGATG TTCAAGAATC AGTATGATAA TGACCAGCTG TTGTTGCAGC AATATGATGC
ACGAGTTAAG AATTTGGAAA CTGAGTTAAT GAATTTTAAC AACACGGCAA CACAACAGAT
TGCATCAAAA GACGAACAGA TCAAGAACTT GGAAGACCAA ATCCTAAATT GGACCAAAAA
GTATGAGTCC TTGGCAAAAT TGTATTCCCA GTTGCGTCAA GAGCATTTGA ATTTGTTATC
CAAATTTAAG AAAATTCAAC AAAAGATCAA TAGTGCTCAG GAATCAATTT TGAAAAAGGA
AAAATTCGAA AAAGACTTGA AAGCAAAAAC TGTTGAGTTG GCTGATTTGA TTCGTGAACG
TGATAGAGCT CGCATGGACT TAGATAGAGT TAGGGCTAGC AAAGATCAAG AAATCGAAAA
TTTGAATGCT GAACTTAGAG AATTGAACAG TCAAGCTAGT GAATCCGGAA AATTACAGTC
GTTGAACCTA TCAAACATAA TCTCTAAACA CGAAACTGAA ATGAATCTGT TAAGAAGAGA
ATTAGCACAA AAGGATTTGA GATTGAAGGA TGCAGGTGAT TCATTTGAAT TGCAAGACCG
ATTGAAAGAA AAAGATATAG AGTTAGAAAT TGCTCAAGAA TCATTGAAGT ATGCACTTGA
AGAGTTATCA ATCTCAAAAA ATGACAACGA AGACGTCGTC AATGCCGAGA TTGATCATAT
TTTGTTGAAG AATATCGATA AACTCCGGAA TTTGATTGAC ATTTTCTTGG AAAACAATAT
TAAAAGAGTT CAAGATATCA AGCATGAACT TTCTTCACCA ATGCAAGCAG GCAATTTGAA
TTCTACACCT GAATATCTCC TTTCTATTGT TGAGCTTTGT CAAGACACTG CAAATGATTT
TGCAACCACT TTCAACAGCT TTATTGCTGA AGGAAAGCAA GCATACGATG ATAATGATAA
CACTTATTCG GAAATTATTT TGTCCAGTTC TGAATTGACT GCGTCGGTGA ATGACTTGAT
GTTGAATTCT AAGGGTATTA CAAAACTGAT ACAAAAGCTG GAAGAAGATA ATCTTCTATC
ATTGGTCTCT AATACTTTGT CCAGTACTGA GAAATATTTT CGAGAATTGA AATCTGACCG
TTTGAACACT TTCAGCGATG ATGAAGATCG GATTGACAGC GTTATTGATT CAAATTTGAC
CTTACAAAAT GATCTTCAGG CTATAGTCCA ATTTGTTGAA AGCTTGAGTT CTAACAGAGG
AATCCTGAGA CTGGGTAATT TGGAAGACTT ACTCAATAAC GAAATGGAAC ACACTGCTCA
AACAGTTGAC TCTGCTTCCA AATTCTTGGA TAAGTTGTTG CAGAACCCAA ATATCCATGG
TGGTAATTTA GAAGTTCATG AGGCTTTACT TTCTGCAGCC AAGGCAGTTA CGCTAGCTGT
GACTCTCTTG ATTTCAGCAG CAACTGAATC TCAACGAGAA ATTGTTAACA AGGGAAGAGG
TTCTCAATCG AGAATTGAGT TTTACAAGAA GAACAGCAGG TGGACGGAAG GCTTAATTAG
TGCATCAAAG GCAGTAGCTG GAGCAACAAA TGTCTTGATT CAGACGGCTG ACGGTGTATT
GCTGGAGTCT AACTCTCATG AACAATTGAT CGTGGCTTCC AATGAGGTTG CTGCTTCTAC
TGCTCAATTG GTTGCTGCAT CCCGTGTCAA AGCTAATTTC ACTTCTAAAA CTCAAGAGAA
TCTTGAGGTT GCATCCAGTA AAGTTTCAAC TGCATGTAAG TCTTTAGTTT CTAAAGTACA
GGCCTTATTG GAAGTTGAAG AAAGCAGCCA ACACGATGTT GATCTCAGCA AGCTTACTCC
TTATGAAGGT AAGACCATTG AAATGGAACA GCAAGTAGAA ATCTTGAAAT TGGAAAACAA
GTTGAACGCT GCTCGGAAGA GACTTGGAGA AATCAGAAAG CATGGCTATA GGGATGATGA
CAGCGACAAT GAGTAA
 
Protein sequence
MSRAEVDLQN SVKKACNNDE VPPKRKHVRA CIVYTWDHKN SRAFWNAVKI QPLQSDEVQL 
FKALIMIHKV LQEGHPNTLK DAYRNRDFLS SLSSVFPSHG TAYGRLINQY DRFILQKLDF
HRNNPGFNGI FEYEEYISLR AVNDPNEGFE SIFQLMDLQD SINDLQKLIF ATINQTPNNL
CKVSALVPLI SESYGIYKFC TSMLRAMYQQ LGDDEALKML FERFDSQHFV LRDFYTDCHA
IKFLTSLITI PRLSNNPPNL QVTDEGTPIS RPRSVSTENT PQISSQPTSN FEAPPNPPPA
VDQLFNQQTG ILFQQQQEQE RIQRDLEMQR LQQLEQQQLQ QRLFEEQQRE QEKRFVQEQQ
ALQQQQSQQQ QTRVSELEHD LLMFKNQYDN DQSLLQQYDA RVKNLETELM NFNNTATQQI
ASKDEQIKNL EDQILNWTKK YESLAKLYSQ LRQEHLNLLS KFKKIQQKIN SAQESILKKE
KFEKDLKAKT VELADLIRER DRARMDLDRV RASKDQEIEN LNAELRELNS QASESGKLQS
LNLSNIISKH ETEMNSLRRE LAQKDLRLKD AGDSFELQDR LKEKDIELEI AQESLKYALE
ELSISKNDNE DVVNAEIDHI LLKNIDKLRN LIDIFLENNI KRVQDIKHEL SSPMQAGNLN
STPEYLLSIV ELCQDTANDF ATTFNSFIAE GKQAYDDNDN TYSEIILSSS ELTASVNDLM
LNSKGITKSI QKSEEDNLLS LVSNTLSSTE KYFRELKSDR LNTFSDDEDR IDSVIDSNLT
LQNDLQAIVQ FVESLSSNRG ISRSGNLEDL LNNEMEHTAQ TVDSASKFLD KLLQNPNIHG
GNLEVHEALL SAAKAVTLAV TLLISAATES QREIVNKGRG SQSRIEFYKK NSRWTEGLIS
ASKAVAGATN VLIQTADGVL SESNSHEQLI VASNEVAAST AQLVAASRVK ANFTSKTQEN
LEVASSKVST ACKSLVSKVQ ALLEVEESSQ HDVDLSKLTP YEGKTIEMEQ QVEILKLENK
LNAARKRLGE IRKHGYRDDD SDNE