| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_84311 |
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| Symbol | PPS2 |
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| ID | 4839275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | + |
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| Start bp | 784227 |
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| End bp | 786371 |
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| Gene Length | 2145 bp |
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| Protein Length | 573 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640390590 |
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| Product | phosphatidyl synthase |
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| Protein accession | XP_001384813 |
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| Protein GI | 150865548 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01456] HAD-superfamily class IIA hydrolase, TIGR01456, CECR5
[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.297407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATTTGAAAAG AAACAAAACT GATTTGTTAA ATAATCAGGC AATCCCATCG AACCTTCAAC
GCTTCTAACT ACTATTCCTT ATCGCTAACG CTAGTATCAT TATTATATTA TCTGCTTATC
GCTGCAAGCT GCACAACATC GACGTTGCAA ACTCGGCTTT TGAAGTAAAA TCATATCGCA
AGTCTTGATA TAATTGGATA GACCTGTGTT TTGCTACCTT GAAATATAGA ATTCAATCGT
ATAATTGGCT GATTCCAAAG TCCAGCTAAC TCTACCGCTC ATTAAGAAGT GATTTCTAGT
TCAAATCATT TTTCACACAT TTCTCAGTTC CACACTTTCT CCATGACAAA CCTGACTTCT
CCAGCAGTCC AAGCGGTACA ATCTCCGCAA TTCCAGTCGT ACTTGAATAA CGACGGTATC
GATGAATTGA CGCCTATCTC CAGAAAGCAC AGGGTTTCGA ATCTCTCCTT GTCGGACTTG
AACCAGTGGC AGAATGGCTT GACCAAGTTG TCTTCTTCCA CTTCTTTGTC CAACAAGAGC
TCGCTGAGCA ACTTGAAGAA GGTGGATTCG TTAGCAAAGT TGCTGAGAAA TTCGTCCATT
ATCAGGAGAA AGAAGAAAAC TGTCATTGAC CATCCTAGAG TTGCATCGTA TGCCTTTTGT
TTCGATATAG ATGGTGTCAT CTTGAGAGGA CCAGATACGA TTCCCGAAGC TTCTAAAGCT
TTAAAGATGT TGGGTGGCGA AAACAAGTAC AACATTACTG TTCCTTCCAT TTTCGTCACC
AACGGAGGTG GTAAGCCAGA ATCGGCCCGT GCCACGGATT TGTCCAAGAG ATTGGGTGTC
AACATTACTC CAGAGCAAAT CATCCAAGGA CACACCCCTA TGAAGGATTT GGTGAATGTC
TATAGTTCGG TGCTTGTTGT GGGAGGTGTA GGAAATGTCT GTAGAAACGT GGCCGAATCT
TACGGTTTCA AGAATGTCTA CACTCCGTTG GATATCTTGA AATGGAACCC TGCTGTGACT
CCGTACCATG ACTTGACCGA GGAAGAAAAG GTAGCTGCTA GAGCAGTTGA TTTCTCAAAG
ATTTCCATTG AAGCTATTCT CGTTTTTGCA GACTCCAGAA ACTGGGCTGC TGACCAACAA
ATCATATTAG AATTGCTCTT GAGTAAGAAC GGTGTGATGG GCACAGAATG TACCACATAC
GATGAAGGTC CATCCATTTA CTTTGCTCAT TCAGATTTTA TCTGGGCCAC CAACTACAAG
TTGTCCAGAT ACGGTATGGG TGCACTTCAG GTGTCCATTG CTGCGTTGTA CAGAGAACAC
ACAGGCCACG AGTTGAAGGT GAACAGATTT GGTAAGCCTC AAAAAGGAAC CTTTAAATTC
GCCAACAAGG TATTGGCCCA CTGGCGTCAG GGTGTATTGG ATGACCACTT GAAGAAGTTG
TCTATTGATG ATCCAAACTC GCACGAAGCT GATATCTTGA TCAACGAACA GGGCGAAGAA
ATTATTAACC AGGCGAAGTT GGAATCGTAC AACTACGATT CAGACGAAGA TAGTTCCGAA
GGCGAATTCA AAGAGCCTTT AGCTGTAGTT GGAAAGGAAG ACAAGATCAC TTTAGAATTG
CCTCCGGCAT CAACGGTGTA TTTCGTTGGT GACACTCCTG AGTCTGATAT CAGATTTGCC
AACTCGCACG ATTCGTCGTG GCACTCTATC CTTGTTAAGA CCGGTGTCTA CAAGGATGGA
ACCGTACCCA AGTATACCCC AAAATATCTC TGTGAGAACG TTTTGGAAGC AGTGAAATAT
GCTATTGAGA GAGAACACGA GAAGGAGTTA TTAGAATGGA ATGAAACTGC TGTAGAAGAC
GATGACGACA AGAGCATCAG AATCAACTTC TCTGATTTAA TGATGACTCC TTCTTCTACA
GTAGAAAAGG AAAAGACTCC AGTACCAGCA ATTGTCAAAA GACCTCACCC TGTCGTTGTT
GCTCAAGATC TCGAAGAACT CGAAGTTCCA CTGTTGTTAA GTCAAGAAAT CGAGAAGGTC
AAGGACGTCA AAGTTACCAA GTAGTCTTCT CTTTTCTTCA TTAGCGAGTT AACATAATTA
TTATTCCAAG TGAACAATAT ATATTCTTTA ATTTAAATCT CTCAT
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| Protein sequence | MTNSTSPAVQ AVQSPQFQSY LNNDGIDELT PISRKHRVSN LSLSDLNQWQ NGLTKLSSST
SLSNKSSSSN LKKVDSLAKL SRNSSIIRRK KKTVIDHPRV ASYAFCFDID GVILRGPDTI
PEASKALKML GGENKYNITV PSIFVTNGGG KPESARATDL SKRLGVNITP EQIIQGHTPM
KDLVNVYSSV LVVGGVGNVC RNVAESYGFK NVYTPLDILK WNPAVTPYHD LTEEEKVAAR
AVDFSKISIE AILVFADSRN WAADQQIILE LLLSKNGVMG TECTTYDEGP SIYFAHSDFI
WATNYKLSRY GMGALQVSIA ALYREHTGHE LKVNRFGKPQ KGTFKFANKV LAHWRQGVLD
DHLKKLSIDD PNSHEADILI NEQGEEIINQ AKLESYNYDS DEDSSEGEFK EPLAVVGKED
KITLELPPAS TVYFVGDTPE SDIRFANSHD SSWHSILVKT GVYKDGTVPK YTPKYLCENV
LEAVKYAIER EHEKELLEWN ETAVEDDDDK SIRINFSDLM MTPSSTVEKE KTPVPAIVKR
PHPVVVAQDL EELEVPSLLS QEIEKVKDVK VTK
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