| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_84262 |
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| Symbol | LTE1 |
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| ID | 4839538 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | - |
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| Start bp | 1136835 |
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| End bp | 1141069 |
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| Gene Length | 4235 bp |
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| Protein Length | 1235 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640390853 |
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| Product | GDP/GTP exchange factor |
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| Protein accession | XP_001385229 |
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| Protein GI | 150865847 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTTGCCTCTA CAATCAACAG CATTATCTCC CAGTCGAACT TGATATCCAG TGATCTAGGG
GAGGATAACA TGTTCTTTGA AAAGAAGATT TTCACCGACT TGAAGATCCA CTGGTTGAAT
CTCATTAATG AGTTCTGGCA AATCGGCGTT GAGATAGATT CCTTGGTCGA AAATGGCACT
ATATTCACTT ATAATTTGCC TTTAGCAGCT GATATTCCCA ACATCAAGAA GCTTTCCAAG
TCGAATACTG AGACCTCTAT CCATACAAAT CCCTCGTATC GACGTTCAGC CATGCTTTCA
TTGTACGATT CAAATGCTCA CCACAAGATG CTCATATTTG ACGGGTCACA CAACGCTAAC
AATGAGGAAA ACCCACAGTT CTCCATCAAT AATCTTCTCT TACTGCACCA GTCGTCGCGA
ATGTCAATTA ACACCAAGAT TCGTGAATTA CAAGAGCATC ATCAACAACA ACACAAACGG
TCTCCTATAT CTACCAACAC CAACCATGCA TTATTCAAAC CATCTACAAC GAAGCAAGAA
TCATCTTCTA GAGCCAGGAA AAACTTGAAA CAGTCTGGAA GACATAACCA TATGAACATA
AAAGACTCCT CATTAGCACT TAAGAAGTAC TCGAAGAATG AGAACAATCC AGAGGCAGTG
AGCTCTGCTA CAAAGTACAA TGCCACTGAG GAACCCGAAG ATCCAGAACA AGATGTTACT
ATAGGAAATA CCACTGTTTT CCAGCCCAAT ATCACGTCTA ACAACTTTCA ATCACCGCCA
CAGAATACAG GATTCTCTAC CAACGGTAAC ATTAAATTGC CGTTCTCAAA AGTAGGATCG
GTACTTCCAC CTACCCCCGT GAAAAAGATG GACTGCGTCC TCAAATCAGA CCAAGAGGCA
CCTGCAACAC CTATACTAGC TCCTCCCAAA AGACCTTCTT TCCAACGACC ACCTACTTTC
AGAGATGGAC CTGTAGAATT GGGTAGAAGA AACTCAATCA AGAGACTTGT AGACGGTTGG
AGGAAGACGT TGGGCCATCC TAGGTCAATC AGAAGTGTAG TGATTTCTGA CACAGACTCG
GCCACAACTT GTTACACCAA TACAGAGAAT AAAAACGAAG AATTGCATAG ACTCATTAAC
AATGCCATCA GCGTTGCTTC TGACGACGAG GAGGAAGAAG AAGAAGCGGG CAGAGTTGAT
ATCTTGACTG CCAGAATCAT TGACGAGTTG GAGTACTTGA TCAGATACTA CGTTGGTAAC
GATGTTGGTA ACGACGTAGG ACACGATACG ATTCTTGAAG ATGATGCCCA GCAGCTGGAC
TTCCAGCTCA AGGGCACTGA TGACGAGTTT GTAGATGTAG AACCAAATAT GGAAGAGGGC
AACGACGAGT GTGACACCAA GTCTATCGAT ATCATGGGCT CTCCAGCTAA GAAACCAAGA
ATATCGATAG CTTCGCCCAA CGCAGCTATG GTAGGTGAGA TAGATGGAGT GTTAGATGAC
GAAGATGCCA GCGACATGGA CATTAATGAC TTGTCGGAGT TGAACATCGT CAAGATAGAC
AATTTGATCA ATACTGAAGA TGACATGGAA AATAACCAGA ACGATGACAA AAAGCCAAAT
ACCCTTAACT TGCTCGAAGC TTCTGCTTCC CAAGAGTCAT CGTTCCAAAG ACCAACCAGC
ATCAACTGGA ACGACGAAGG GAATTTGGAT CTTGAGAATT CCAACGTTAA TGAGGCATCT
GGAGACATCG ATGATGATGA AGAAGAGGAA GAAGATGAAC AGGGAGCCGT ACTAGTAGAA
TCTACAGGGG TCGTAAAAGA AGATGAAGTA GAAGATTACG ATAATGACGA ATTGCCTGAA
CCTCTGATGC CACTTGAGAA AAAGAAGTTG CTCAATGGTG CTCAATACAA TGTTGGTGAA
GACATCCATC TGTTTTCTCC ATTCAATCAT GCCAATAACT CCAACGATAC ATCTATCTCT
ACACCAAGCA ACATCACTCA ATATGATGCC GAAATCGCTG ACTTGGGAAT CGCTTTGAGT
CCTCAGCTGA TGAAACAAAC AACACAGTAT CCACAGATCA AGAGGATAAG CTTCAGTGAA
AACACTTCTT TCCAAGCAAG ACGCACTTCT ACCATGTCAA GATCTTCTGG CTCTATTTTG
AGAAGAGATT CAGTTAAGTC CTACCTCAGT TATGATTCTG CATTCTCCGT TTCCAACGGT
TCACATGGCT CAGACCAGAT CTTTGATCAT GACACTGGTT TGAGAAAGAA AACTGGTTAC
AACGACTTAC GAGTTTTGGC TGGAAGCAAT GGTGATTCTT TGACTGCTGA GGATAGAAAG
TCACTTGAGC TTGCTGCCAA CGTCAAGACT ACGTCTATGA ATTCATACGT TTCCAGATCT
TCATCTACAA GGAAGAGTAT TAGATTTAGC ACGTTGTACG CCTTAACGGA ATTACCATTC
AATGCTAGTG ACGAGAAAGT GTACCAATCC AGCAGAAAGG CCTCTCTAGT TCAGAGATCA
ACAATGTCAG AAGAAATGGA AGACAGCTCG ATCTTTTCTG TCACTATGAA GAGCAACAAG
AATTCTGTCA GAACAAATGG TGGAGAAGGT CGTTCTAGTA ATGCTGGATC AGACCATTCA
GTAGCAATTC CTGGAATCAG CAACAATGTC TTGAAGGAAT TGGCTGCTAT TCCAGATGAA
TCATATCAAT CTAGAGATCC TGTAGAATTT GCTTTGAACA AATTGGAGGG TAGAAGGTCC
GAAAGCACCG TGCTGAAACT GCAATCCAGG CCAGTTAGTG GTCAGTCAAT CAAAAATCGT
AATAGCGCCA AGAGCGAAGA ACCTACGAAT GCCGAAGAAA TTCATGAACT CAAGCAGCTG
AACAATACAG AGGAAATACT CCACGCAATC AACAATGCCA ATACGGAGGA TGCCATTGAA
TTTACAGATT ACGATATGAC TCAAGAACCT CCATTGACAC CAATCAAAAA GAAGAGCAAT
CCAGCAAAGA ACCCAATCAC TTCCACTCCA AACAACGATA GTATTATCTA CCTCAACCAA
TCGGCTATGA ACACCCGTTC TTCTAGTCCT GTATTCCAGA CTCCAAAGAT AATCTTGGAC
AACTATTCAT TACATAATGT CTATCTTTCA GTTGAGAATG TAATGGATAA CGAGACACAT
ATATCATTTG TGTTAAGCAA CGACTCGACA TCACTAGCCA ACCATTTCAC CATGATTGAG
AAGGACATGT TACAGGAAGT GGACTGGAAG GAATTGATTG AGTTGAAATG GAACAAGGAA
TTGAATCCAG TGAATAGTTG GTTGGAAATC ATCGTCAACG ACAAGTACTA CAATGCCAAT
AAGGGTGTAA ATTTAGTTAT TGCCAGATTC AATTTGATGG TCAATTGGAT TATTTCAGAA
ATCATCTTAA CTAAAAACCA AAAGGAAAGA ATCAGTATCA TTTCCAGATT TATTCACATT
GCTCAGAAAT GTTACACTTT GCAGAATTTC TCAACTTTGA TGCAAGTCAT CTTAGCACTC
ACATCCGAAA AGGTTCAACA ATTAAGATAT ACTTGGAAGA ATTTGGCTCC TGGCGACATT
TTGATGCTCA AAAACTTGGA AGAATTGTCT TCTCCATTGA AGAATTTCTT GAACATCAGA
TTGTGTATTA ACCACATGAA GCCCTCGAAG GGTTGCATAC CATTTGTTGG TCTTTATCTT
TCTGATTTGG TGTTCAATGC CGAAAGACCA ACGTTCATAA AAAGGGGTAT TGTCCAGAGA
GACTTCGGAA CTCCAATTTC TTTGGCAGCT CCAAGCTTTC CAGATCTAGA TGACACTGCT
TCTACCATTA ATAGTCGAAA CGAGTCTGAA AAGTTAGTCA ACTTTTCAAA GTTCAGAACT
TCGGTTCATA TTGTCAAGTC GTTGTCTCAG TGTATTGAGT GGTCCTCTAA CTACGAGATG
GAAATCGACC CAGATTTATT GTCCAGATGT CTTTACATCA AATCCTTGGA CGAAGAGGAA
ATGAACTACT GTTTGGAGAA CATTGACGAT TATTAGTATT TTTATTTTGT ATTCTTAACG
AGATCCCTAA AGTGCGATTG CTGGTTTCTC TTTCACTTTC ATTTCGTCAC GTTTAATTAA
TTAATCCTTA TCGCCATTTT GAACATGTGT AAAACTATGT ACACTAATAG CCGCACCGTT
TTTCGCAGCC AAAAGTAGCC AATATACATT AATAC
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| Protein sequence | MFFEKKIFTD LKIHWLNLIN EFWQIGVEID SLVENGTIFT YNLPLAADIP NIKKLSKSNT
ETSIHTNPSY RRSAMLSLYD SNAHHKMLIF DGSHNANNEE NPQFSINNLL LSHQSSRMSI
NTKIRELQEH HQQQHKRARK NLKQSGRHNH MNIKDSSLAL KKYSKNENNP EAEPEDPEQD
VTIGNTTVFQ PNITSNNFQS PPQNTGFSTN GNIKLPFSKV GSVLPPTPVK KMDCVLKSDQ
EAPATPILAP PKRPSFQRPP TFRDGPVELG RRNSIKRLVD GWRKTLGHPR SIRNSATTCY
TNTENKNEEL HRLINNAISV ASDDEEEEEE AGRVDILTAR IIDELEYLIR YYVGNDVGND
VGHDTILEDD AQQSDFQLKG TDDEFVDVEP NMEEGNDECD TKSIDIMGSP AKKPRISIAS
PNAAMVGEID GVLDDEDASD MDINDLSELN IVKIDNLINT EDDMENNQND DKKPNTLNLL
EASASQESSF QRPTSINWND EGNLDLENSN VNEASGDIDD DEEEEEDEQG AVLVESTGVL
LNGAQYNVGE DIHSFSPFNH ANNSNDTSIS TPSNITQYDA EIADLGIALS PQSMKQTTQY
PQIKRISFSE NTSFQARRTS TMSRSSGSIL RRDSVKSYLS YDSAFSVSNG SHGSDQIFDH
DTGLRKKTGY NDLRVLAGSN GDSLTAEDRK SLELAANVKT TSMNSYVSRS SSTRKSIRFS
TLYALTELPF NASDEKVYQS SRKASLVQRS TMSEEMEDSS IFSVTMKSNK NSVRTNGGEG
RSSNAGSDHS VAIPGISNNV LKELAAIPDE SYQSRDPVEF ALNKLEGRRS ESTSIKNRNS
AKSEEPTNAE EIHELKQSNN TEEILHAINN ANTEDAIEFT DYDMTQEPPL TPIKKKSNPA
KNPITSTPNN DSIIYLNQSA MNTRSSSPVF QTPKIILDNY SLHNVYLSVE NVMDNETHIS
FVLSNDSTSL ANHFTMIEKD MLQEVDWKEL IELKWNKELN PVNSWLEIIV NDKYYNANKG
VNLVIARFNL MVNWIISEII LTKNQKERIS IISRFIHIAQ KCYTLQNFST LMQVILALTS
EKVQQLRYTW KNLAPGDILM LKNLEELSSP LKNFLNIRLC INHMKPSKGC IPFVGLYLSD
LVFNAERPTF IKRAPSFPDL DDTASTINSR NESEKLVNFS KFRTSVHIVK SLSQCIEWSS
NYEMEIDPDL LSRCLYIKSL DEEEMNYCLE NIDDY
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