| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_83803 |
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| Symbol | |
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| ID | 4839548 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | - |
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| Start bp | 1363276 |
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| End bp | 1365391 |
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| Gene Length | 2116 bp |
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| Protein Length | 635 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640390863 |
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| Product | predicted protein |
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| Protein accession | XP_001385268 |
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| Protein GI | 150865877 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0685] 5,10-methylenetetrahydrofolate reductase |
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| TIGRFAM ID | [TIGR00677] methylenetetrahydrofolate reductase, eukaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.163002 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000293877 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATCAATGGCT ACTATCAAGC AGAAGATCGC GGCCTTGGGC CCCGACGAAA AGTTTATTTC
GTTCGAGTTT TTCCCGCCGA AAACCGATTC TGGGTTTCGC AATCTTCTTG CTAGATTGAA
TCGTATGCTG GCTTTGAACC CACTTTTCAT TACGGTGACA TGGGGAGCTG GGGGATCCAC
CAGTGAAAAG TCGCTTGACT TGGCTGCAAC GTGCCAGAAT GATTTGGGTT TGACGACGAT
TTTACATTTA ACCTGTACCA ATACAAATAA GGAGATCATT GATGAAGCTT TAAAGCGAGC
CAAAGAGTCT GGCATCAGGA ATATTTTAGC TTTAAGAGGG GACCCACCTC GAGCAGAAGA
GTACTGGACT CCCAACTGCG ACTTCAACTC TGCTGTCGAC TTAGTGAGGT ATATCAAAGA
GAACTACGGC GACTATTTCT GTATTGGTGT CGCAGGATAT CCAGAGGGAC ATGTTGATGG
ATCTGATGGA GCAGACCAGA ATCCTCAGAA GGACATTCCG TATTTGATTG AGAAGGTAGA
AGCTGGTGCA GATTTCATCA TTACCCAGTT GTTCTACGAT GTAGACAAAT TTATCGCCTA
TGATAGCTTG TTGAAGTCAT ATGCTCAGTT GAAGGACGTG ACCTTGATCC CTGGTCTTAT
GCCCATCACC ACATACAAGG TCTTCACTAG AGCCAGTAAG CTTTCACATG CCTCGATTCC
CAAGACGATT TCTCGTAAAC TTGAGGCTTC TGTAGGAAAT GACGATGCCA TCAAAAGTCT
TGGTGTAGAG ATCGTTTCTG ACATCATCAA CACCATCACG TCTAAGACAT CTATAAAGGG
ATTCCATTTC TATACATTGA ACTTGGAAAA AGCTGTAGCT TCTATCTTAA AGAACCTGAC
TGTAATGCAG ACCATCATGG AACGAGCCTC CTCGACCGAA GAAAGCATCA ACGACGACGC
CATTGCTTCT TCGGACGAGG AGGAGGGAAA AAGGAAAGTT ATTCCGAAAG TAAGCAAACG
TAGAAAGTCT TCTATCATTA ACGAGAACAG TCTTTCAGAC AAGTCCCTCG CTCTCTCAGC
ACAACGTAGT CTTGTTGGAA AGGCATTGCT TAAAGACAAG AAGGTGTTGG TGGATATTAG
TACTGGCAAG GGTGCCTTGG GTAAAGAAGC CATCTGGGAT GATTTTCCCA ATGGAAGATT
CGGAGACTCG AATTCGCCAG CGTATGGTGA AATCGATGGT TATGGGCCCT CATTGAAAGT
AGCTTCACCT GAAGAAGCAA TTGCGAAATG GGGCTCCCCA GAATCCGTCG GTGACATCGC
CAAAGTGTTC ATGGGATATT TATCTGGTAA GATCGATATA TTGCCGTGGA CAGATAGCTC
GTTATCTGCT GAAACGACTT TGATCCAGGA GGAACTTTTC GACTTGAACG ACAGAGGTTG
GTTCTCGTTG GCTTCACAGC CAGCAGTCAA TGGTTGTAAA TCTACAGATA GGATTTTTGG
TTGGGGTCCT AAGAACGGTA TTGTCTACCA GAAAGCATTT GTCGAGATCT TTGTACCCAA
AGAGCAATGG GAATCAGAAT TGAAGTCCAG TTTGAAGCCT CATTTTGAAG AAAAAACCAT
TACCTACTAT GTTGGTGATG CTGAAGGCAA CATCGAGTCC AATCTCTTCG TGGGCCCAGA
TGCCCACAAC AGCAAGAATG CCATCACATG GGGAGTGTTC CCCCTGAAGG AAGTGTTGCA
GCCTACCATT ATTGATTACG AATCTTTCAA GGCTTGGAAC GAAGAAGCGT TCCTTTTATG
GATCGAATGG GCTCGTTGCT ACAAGAAGAA CACCAAGACA TTCCAGTTAC TCAATTCCAT
CTACTCCAAC TACGTGTTGG TGAGTTTGAT CCACCATGAC TTCACTGACG AAGCTGGCTT
GTGGACGCTC TTGTTGCAAT GACTCCCGTC CAGATGGAAG CTCTGACGGT GTCTCTGGAC
AATAGGCTCC GGTATCTTCC ATCACGAGTG TGTTGATTGT CTATAGGAGT ATCATGTATA
TTATAAGTAT AATCATTATC ATTATCATTA GTTAGAAGCT ATTCATATAA GTAGAATACA
CAGTATGATG CCTTGT
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| Protein sequence | MATIKQKIAA LGPDEKFISF EFFPPKTDSG FRNLLARLNR MSALNPLFIT VTWGAGGSTS
EKSLDLAATC QNDLGLTTIL HLTCTNTNKE IIDEALKRAK ESGIRNILAL RGDPPRAEEY
WTPNCDFNSA VDLVRYIKEN YGDYFCIGVA GYPEGHVDGS DGADQNPQKD IPYLIEKVEA
GADFIITQLF YDVDKFIAYD SLLKSYAQLK DVTLIPGLMP ITTYKVFTRA SKLSHASIPK
TISRKLEASV GNDDAIKSLG VEIVSDIINT ITSKTSIKGF HFYTLNLEKA VASILKNSTV
MQTIMERASS TEESINDDAI ASSDEEEGKR KSSIINENSL SDKSLALSAQ RSLVGKALLK
DKKVLVDIST GKGALGKEAI WDDFPNGRFG DSNSPAYGEI DGYGPSLKVA SPEEAIAKWG
SPESVGDIAK VFMGYLSGKI DILPWTDSSL SAETTLIQEE LFDLNDRGWF SLASQPAVNG
CKSTDRIFGW GPKNGIVYQK AFVEIFVPKE QWESELKSSL KPHFEEKTIT YYVGDAEGNI
ESNLFVGPDA HNSKNAITWG VFPSKEVLQP TIIDYESFKA WNEEAFLLWI EWARCYKKNT
KTFQLLNSIY SNYVLVSLIH HDFTDEAGLW TLLLQ
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