| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_83606 |
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| Symbol | DUS3 |
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| ID | 4838835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | + |
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| Start bp | 1715759 |
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| End bp | 1717747 |
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| Gene Length | 1989 bp |
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| Protein Length | 613 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640390150 |
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| Product | dihydrouridine synthase of tRNA |
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| Protein accession | XP_001384281 |
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| Protein GI | 126135514 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.85826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CCTATCTAGT TGGCTCATAG CTATATTCTG CAAGTGTATA TTTATTATAT ACACATCGTC
ATTTGTGTAG AATTGGTATC ATTAGTCCAC GATGACTGCT GGTGAAAAAC GTACTTCAGA
AGCCTTGGAT CAACCTGAGT CCAAGAAGGT TCATGTCGAA AGAGGCATGG CTGCCATCAA
ACCAGAATTC ATAGTACAGA AAGATCGCAT TGTAGATTCT TTTGACGACG ATGAAGCTGA
AGGTGGAGAA AGAGGTGTCG AAGAAGGTAA ATCTGGGAAA GGAGGAAAGA AAAAGAGAAG
AGGACAGAAC AAGAACAGAG ACTTGAAGCA GAAGAGAGAA GAAATCAGAT TATGTACTTC
TCTCTTAGAC CCCGACAATA TCAAAACTTG TGCATATGGA CCAGAGCAGT GTCGGAGTAC
ACATAATGTC GAGGAGTATC TTGCCTCCAA GCCCGTTGAC ATTGAAGGAA TCTGCCCTGT
CTTCAGAGCC ATTGGATACT GTCCAGCTGG ATTGAAATGC AGATGGTTGC AATCTCATTA
TGACAAGGAG ACCCGCAAGT TAATTAAGGA CTTAGGTAGA ACCGAGGCCA GTAAAATAGA
ATTGAACTAT GAAGTGAACA ATGTCTCCCA CGAAGCCAGA GGTAAGTTGA GAAAGAAACA
ATATGACTTC GCTATTGCTG GCAAAGTAAT TGAGTACATC GACTCTACAG TTCAGAACGA
CGAAAACATC GCAAACGCTA AGGAGCAGAG AAAGAATAAC GAAGCAACTT ATGTTGACGC
ACCTTACAAG ATCGCTGAAA AGAAAAGACT TGACTTCAGA AACGCTAAGA TCGTCTCTCC
TTTGACTACT GTAGGGAACT TGCCATACCG TAGACTTATG AAGAAATTGG GAGCTGATAT
CACCTACTCA GAGATGGCAC TTTCTGTTCC ATTGCTTCAG GCAACCAATG CTGAATGGGC
TCTTCCAAAG GCTCACCGTA CCGAATATCC AGGCTACGGT GTTCAAATCG CAACATCCAA
ACACTGGGCT GCTGCCAAAG TAGCCGAAAT TATCTCCAGA GAAACCGAAC ATGTCTCTGA
ACTCAACTTG AACTGTGGGT GTCCTATTGA TCTTTTGTAT AGACAAGGCC AGGGATCTGC
TCTTTTGGAG CAGCCAGCTA GATTGGTGAG AATCTTGAAG GCTATGAACG CCTCTTCAGG
TGACATCCCA GTCACTGTCA AGATCAGAAC GGGATCTAAA GAAAACAAGA ACACTGCAAA
AACCCTTGTC GAACGTTTAC TAGCAGAAAA CGATGTGGCT GCTATCACTT TGCATGGTCG
TTCAAGGCAG CAGCGTTACA CCAAAGAAGC CGACTGGAAC TACATTGCTG AAGTTGGACA
GGTTGTGCAA CAATGGAACG ACAAGAAGGA AGAAAACAAG GACAGTCGCG ATACGCAGAG
AACTTGTTTT GTGGGTAATG GCGATGTTTT CTCTCATGTA GATTGGTACA ATGCTGTCAA
CACCGATGGT ATCGACTCAG TCATGGTGGC TAGAGGTGCC TTGATCAAGC CATGGATCTT
TGAGGAAGTT GAGGCTCAAC AGTATTTGGA CAAGACTGCT ACAGAAAGAC TCGATATCTT
GAAGACTTTC TCTGATTATG CTCTTGAACA TTGGGGTACT GATGAATATG GTGTAGGATT
GGCCAGACGG TTCATGTGTG AGTTCTTGAG TTTCACCCAT AGATACATCC CATTGGGTAT
CTTGGAAAGG CTTCCTCCTA AGATCAACGA GAGACCACCA CAATGGAAGG GTAGAAACGA
GATGGAAACT TTGCTTGGAT CTACAGACTA CAAAGACTGG ATCAAAATCA CCGAGATGTT
CTTGGGCAAG TCTGGGGACG ACTTTGTGTT CACACCTAAG CACAAGAGTA ACTCCTACGA
AAAGTCGAAC TAAATAACAA GGATACATTT GAAAATACAT AGTAGCGACA AAGCAATCTC
ATAAGAATT
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| Protein sequence | MTAGEKRTSE ALDQPESKKV HVERGMAAIK PEFIVQKDRI VDSFDDDEAE GGERGVEEGK
SGKGGKKKRR GQNKNRDLKQ KREEIRLCTS LLDPDNIKTC AYGPEQCRST HNVEEYLASK
PVDIEGICPV FRAIGYCPAG LKCRWLQSHY DKETRKLIKD LGRTEASKIE LNYEVNNVSH
EARGKLRKKQ YDFAIAGKVI EYIDSTVQND ENIANAKEQR KNNEATYVDA PYKIAEKKRL
DFRNAKIVSP LTTVGNLPYR RLMKKLGADI TYSEMALSVP LLQATNAEWA LPKAHRTEYP
GYGVQIATSK HWAAAKVAEI ISRETEHVSE LNLNCGCPID LLYRQGQGSA LLEQPARLVR
ILKAMNASSG DIPVTVKIRT GSKENKNTAK TLVERLLAEN DVAAITLHGR SRQQRYTKEA
DWNYIAEVGQ VVQQWNDKKE ENKDSRDTQR TCFVGNGDVF SHVDWYNAVN TDGIDSVMVA
RGALIKPWIF EEVEAQQYLD KTATERLDIL KTFSDYALEH WGTDEYGVGL ARRFMCEFLS
FTHRYIPLGI LERLPPKINE RPPQWKGRNE METLLGSTDY KDWIKITEMF LGKSGDDFVF
TPKHKSNSYE KSN
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