| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_83587 |
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| Symbol | SUB2 |
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| ID | 4838602 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 102120 |
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| End bp | 104042 |
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| Gene Length | 1923 bp |
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| Protein Length | 433 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640389917 |
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| Product | Suppressor of the cold-sensitive snRNP biogenesis mutant brr1-1 |
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| Protein accession | XP_001384319 |
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| Protein GI | 126135590 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TCGAAAACAC TCCCCAATTG ATCCACAACA ATGTCGCACG AAGGACAAGA AGAATTGTTG
GATTACTCCG ACTCTGAAGA AATCGCCGTT CCAACCACCA CCGAAGTGGC TGGCGCAGAT
TCTGCCACTG ATAAGGAAGC TGACAAGAAG GGATCCTACG TTGGAATCCA TGCCACCGGG
TTCAGAGACT TCTTGTTGAA GCCAGAATTG TTGAGAGCCA TTGGAGACTG TGGTTTTGAA
CACCCTTCAG AAGGTTCGTA TACTTAGAAC ATCACATGAT GACAGAAGAA AACCTGGCGA
TTCAGCATCA TAAGTATCAA CACCGCGTTC ACCGACATGT TCTGTTCTTA ATGAATAATC
CCAGCATATT ACCAATTGGA TCATTATAGA TATGGCACGA AAGACAAATT CCATATCTTC
AAAGTTTGTT TATTACTCTT GAAGTTTCAG AAGTTCGAAA GTTTTCAAGA TTCTATACAT
GATTGAAATT GTTTTTGGGA TAATGATACA TTAGTTATTA TCACAATACT CATGGTGGTC
TTCACTATTG TCAATATGAA ATTGATTGCT GTATCCCAGC AAATCACTTA TAGATACCAC
GATAATATGA GCGTCGATAT CTTCTATAGA GACCTAGATG TCAATGATAT CATACCATAA
TTTCACTAAA TTCTGGTAAA GGTCTAGATG TTTGATCATT ATGTCCACAA ACCGCATCAC
AGTCAATCTT TTGTCGTCAT TATTTTGCCT CTCTTCTTCA CTAACTAACC TCATCTAGTC
CAACAAGTCT GTATTCCACA ATCCATTTTG GGTACTGACG TTTTGTGCCA GGCTAAGTCT
GGTTTGGGTA AGACGGCCGT GTTCGTCTTG TCTACCTTAC AACAGTTAGA CCCAGTTCCA
GGTGAAATTT CCACCTTGGT TATCTGTCAC ACCAGAGAAT TGGCCTACCA GATCCGTAAC
GAATACGCCA GATTTTCCAA GTATATGCCA GACGTTAAGA CCGAGGTCTT TTATGGTGGT
ACTCCAATCA AGAGAGACAT CGAAAAGTTG AAGAGCAAGG ATACATGTCC TCACATTGTA
GTTGCTACAC CAGGTAGATT ACATGCTTTG GTTAACGAAA AGGCTATCCG TTTGTCCAAC
GTCAAGTCTT TTGTTATCGA TGAATGTGAC AAGGTCTTGG AATCCATCGA CATGAGAAGA
GACGTCCAGG ACATTTTCCG TGCTACTCCT CACCAGAAGC AAGTGATGAT GTTCTCGGCT
ACTTTGTCGC AGGAAATCCG TCCCGTCTGC AAGAAGTTCA TGCAAAACCC CTTGGAAATC
TACGTCGACG ACGAAGCCAA GTTGACTTTG CACGGCTTGC AACAGTACTA CATCAAGTTG
GAAGAGAAAG AAAAGAACAG AAAGTTGTCT GACTTGTTGG ACTCATTAGA ATTCAACCAG
GTCATCATTT TTGTGAAGTC TACTCAGAGA GCCAACGAGT TGAACAAGTT GTTGTGTAGT
TGTAACTTCC CATCTATTGC TGTCCACTCT GGTTTGCCTC AAGAAGAAAG AATTGAGAGA
TACAGATCTT TCAAGGAATT CAACAAGCGT ATCTGTGTTT CCACCGACGT TTTCGGTAGA
GGTATTGATA TCGAAAGAAT CAACTTGGCC ATCAACTATG ACTTGCCAAA CGAAGCCGAC
CAGTACTTGC ACAGAGTAGG TAGAGCCGGT AGATTTGGTA CTAAGGGTTT GGCCATTTCT
TTGGTGGGAT CCAAGGAAGA CGAAGAGGTT TTGGAAAAGA TTCAATCCAG ATTCGATGTT
AAAATCACCG AGTTCCCAGA AGAAGGTGTT GACCCATCCA CTTACATGAA CACCTAATCG
GGTCATTAGT GTTTTGTAGT AGGTGCCTTG TATTAGTACA GTAAGAATAA AAGTTTGTTC
AAG
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| Protein sequence | MSHEGQEELL DYSDSEEIAV PTTTEVAGAD SATDKEADKK GSYVGIHATG FRDFLLKPEL
LRAIGDCGFE HPSEVQQVCI PQSILGTDVL CQAKSGLGKT AVFVLSTLQQ LDPVPGEIST
LVICHTRELA YQIRNEYARF SKYMPDVKTE VFYGGTPIKR DIEKLKSKDT CPHIVVATPG
RLHALVNEKA IRLSNVKSFV IDECDKVLES IDMRRDVQDI FRATPHQKQV MMFSATLSQE
IRPVCKKFMQ NPLEIYVDDE AKLTLHGLQQ YYIKLEEKEK NRKLSDLLDS LEFNQVIIFV
KSTQRANELN KLLCSCNFPS IAVHSGLPQE ERIERYRSFK EFNKRICVST DVFGRGIDIE
RINLAINYDL PNEADQYLHR VGRAGRFGTK GLAISLVGSK EDEEVLEKIQ SRFDVKITEF
PEEGVDPSTY MNT
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