Gene PICST_83561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_83561 
SymbolALG11 
ID4838404 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp552888 
End bp555367 
Gene Length2480 bp 
Protein Length606 aa 
Translation table12 
GC content42% 
IMG OID640389719 
Productprotein required for asparagine-linked oligosaccharide assembly 
Protein accessionXP_001384403 
Protein GI126135758 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GGTTGCCTGG TGTTAATTGG GGTTCTCTCT ATGGTTGGTC GAAGGGGGTT CGCGACATAG 
AAGACGCGAC ATTGCCTCTA GACATTTGGC ATAAGGTTAA TTGTTACATT CTTACACTGT
TACATTACTT CTAATCAGGT TAAGATACGA TTGGCATACA ATTAAGAGAC AATATCCAGG
CATCTTGATA ACGCAAACCG GAATGCAAAG CAGAATGCTA AGAAATGTCT TCTAAATCTT
GATCATCTTT CAAGATATGT TATTCTTTAG ATTATTCTCT TGCACTTGCT GGTGTATCCC
TTTCTTTTAC GTAGACTCGG CTTCTCTAAC GAATCCTCCA TATCGTACCC TAATTATCCT
CATCTGAACA TGTTCTTGAC TGTTCTTGAC TGTTCTTGAA AGTCTCCCTA TTTAATTAGA
TTTTGCACCC ATATATCACG TGACTCGTTT TGCATACTTA ACAGAAGAGA TCTTGGAAAT
CTCCATGGTT TTCAGTCTCT TCTCTCATCA CTGCTGAAAT ATCCGTTCGA CTTCAGAAAT
CCGAGGAATT GCTTCTGTAT TTCTCTGCCA GATCTGACTG TCTCTATGTT TCTCATCATA
GCAGTACTTG TTGTAGTTTT TGTGGTCTAC AAGTCGTTCA CCAGCGTACT CCCACATTAC
TTTGTGGTCC CCCACCAGAA CTGGAGGGAA CGAATTGCCA AAGTTATCAA GCATGACAAA
CCCATTTACT TGAATGTAGG GTACAAAAGA TCGAGCTATC GTCGTCGTCT TATACTTGCC
AGTATTCAGC CGTCTTTCTA TACGAATTTC AGAAACAACA AGATCAAGCT TCAGCCAGAA
GATGCCGCGA AGGATAATCA ACGGTTCCTC ACAGAGATGA GAAGAAGAGG TGTAGACGAT
CCGAGCAGAA AGCTTCTATA TGGCTTTTTC CATCCGTATG CCAATAATGG TGGTGGTGGT
GAAAGAGTGT TGTGGCAGGC TGTTGGAGCT ACACTAGAAG CCAATGTCAG AAATATCGCT
GTAGTGTATA CCACCAATAT TGAAGCAGAA CCGCTTCAGA TTTTGCAAAA GGCTGAGGAT
AAGTTTCAAG TAAGTGGTTT AGATTCTTCA AGAATCGTTT TTATATATTT GCGTAGGTTT
GGTCATTTGA TAGATGGTGC TTACTGGAAG CATTTCACAC TAATTGGCCA ATTGGTGGGA
TCTATGTTAC TTGGGCTTGA AGCCTTGTTT GAACTCACTC CCGATATCTG GATTGACACC
ATAGGCTTAC CCGGAAGTTA TTTGTCAGTA ACATTCATAT TGAGACTTCC TATTCTTGCC
TATGTTCATT ATCCCATCAT CCAATCAGAC ATGTTCAATA AATTGAAGTT TAAGGCGTTC
ACCACGGCCG AGTTTGGGGA GTTTAACTTC AGTGCCAGAG ACTTTGTAGA AGCTGGCAAG
TTTGTTTACT GGTCTATGGT GTACTACTTC TATGTGTATT TGGGCTCTAC GGTAGATGTG
ACATTAGCCA ATGGCACTTG GACATTCAAT CATATCTCCA ACATCTGGTC TTTCAACCGT
ATCTTGGGCC ACAAGTTGGA AAAGTTGTAT CCTCCTTGTG GAACAGAGAC GTTGACTAAG
GAAGTGAATC TTGAACAAAA GAGAGAAAAC AAATTGTTGT ATATTGCCCA GTTCCGTCCC
GAGAAAAGAC ACTCGTTGTT TGTAGACGAA TATGCGCAGT TTTTGAAAAA GAACTTTGCC
AACGTCAAGG CTGACGATGC TGATATTCCC AAGTTGGTGT TTCTCGGTTC ATGTAGAACT
GCTGACGATA CTGCAACTTT GCACTTGATT CAAAGCAAAG TCGAGAAGGC TGGATTACAG
GATTATGTTG AATTTATTGT TGACTGTTCA TATGACGAAG TTGTCGACCA GCTTTCCCGA
GCCAAGTTTG GTTTGAATGC CATGTGGAAC GAACACTTCG GAATAGGTGT AGTTGAATAT
TTGGCTCGTG GCGTGGTTCC GTTGGTACAT GCCTCAGCAG GTCCATGGTT GGATATTGTT
ACGGGCTGGA ACGATGAAGA AAACAAGCTC AATTGGCACA ACAACTCTGG CTTCTTTTTT
AAAAGCATGG ATGATCCTGA TTTTGATCCT TCCGTTCAAG AAGAAACTGA AGAGGGATTC
ATTACTTTTA ATGTAGAAAT CGAGCAAGGG GAGGTACAGA GAGCTCAATA CCCTAGTTTC
TCGGGATTGC TCTACCACAT CTTTGTCAAG TCACCAGAGT TGGTTTCTGA CAAACGGTTG
GACGAAATGA GACACAACGG GTTGAGGTTG GTGAAGGAGA AATTTTCCAA TGGAGTTTTT
AGTGAAAGCT GGAAGAAGTA CGTAGGTGAA CTCGAGGAGT TGGAGGTGGA CTACCGTTCC
GAGAAGGACG ACGTGGTGCA GGTGTATTGA TAATAAGAAT AATGTATATA TAAGATATTT
CCAATGTATA AAGAAGTTTC
 
Protein sequence
MVVFVVYKSF TSVLPHYFVV PHQNWRERIA KVIKHDKPIY LNVGYKRSSY RRRLILASIQ 
PSFYTNFRNN KIKLQPEDAA KDNQRFLTEM RRRGVDDPSR KLLYGFFHPY ANNGGGGERV
LWQAVGATLE ANVRNIAVVY TTNIEAEPLQ ILQKAEDKFQ VSGLDSSRIV FIYLRRFGHL
IDGAYWKHFT LIGQLVGSML LGLEALFELT PDIWIDTIGL PGSYLSVTFI LRLPILAYVH
YPIIQSDMFN KLKFKAFTTA EFGEFNFSAR DFVEAGKFVY WSMVYYFYVY LGSTVDVTLA
NGTWTFNHIS NIWSFNRILG HKLEKLYPPC GTETLTKEVN LEQKRENKLL YIAQFRPEKR
HSLFVDEYAQ FLKKNFANVK ADDADIPKLV FLGSCRTADD TATLHLIQSK VEKAGLQDYV
EFIVDCSYDE VVDQLSRAKF GLNAMWNEHF GIGVVEYLAR GVVPLVHASA GPWLDIVTGW
NDEENKLNWH NNSGFFFKSM DDPDFDPSVQ EETEEGFITF NVEIEQGEVQ RAQYPSFSGL
LYHIFVKSPE LVSDKRLDEM RHNGLRLVKE KFSNGVFSES WKKYVGELEE LEVDYRSEKD
DVVQVY