Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_83561 |
Symbol | ALG11 |
ID | 4838404 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | - |
Start bp | 552888 |
End bp | 555367 |
Gene Length | 2480 bp |
Protein Length | 606 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640389719 |
Product | protein required for asparagine-linked oligosaccharide assembly |
Protein accession | XP_001384403 |
Protein GI | 126135758 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GGTTGCCTGG TGTTAATTGG GGTTCTCTCT ATGGTTGGTC GAAGGGGGTT CGCGACATAG AAGACGCGAC ATTGCCTCTA GACATTTGGC ATAAGGTTAA TTGTTACATT CTTACACTGT TACATTACTT CTAATCAGGT TAAGATACGA TTGGCATACA ATTAAGAGAC AATATCCAGG CATCTTGATA ACGCAAACCG GAATGCAAAG CAGAATGCTA AGAAATGTCT TCTAAATCTT GATCATCTTT CAAGATATGT TATTCTTTAG ATTATTCTCT TGCACTTGCT GGTGTATCCC TTTCTTTTAC GTAGACTCGG CTTCTCTAAC GAATCCTCCA TATCGTACCC TAATTATCCT CATCTGAACA TGTTCTTGAC TGTTCTTGAC TGTTCTTGAA AGTCTCCCTA TTTAATTAGA TTTTGCACCC ATATATCACG TGACTCGTTT TGCATACTTA ACAGAAGAGA TCTTGGAAAT CTCCATGGTT TTCAGTCTCT TCTCTCATCA CTGCTGAAAT ATCCGTTCGA CTTCAGAAAT CCGAGGAATT GCTTCTGTAT TTCTCTGCCA GATCTGACTG TCTCTATGTT TCTCATCATA GCAGTACTTG TTGTAGTTTT TGTGGTCTAC AAGTCGTTCA CCAGCGTACT CCCACATTAC TTTGTGGTCC CCCACCAGAA CTGGAGGGAA CGAATTGCCA AAGTTATCAA GCATGACAAA CCCATTTACT TGAATGTAGG GTACAAAAGA TCGAGCTATC GTCGTCGTCT TATACTTGCC AGTATTCAGC CGTCTTTCTA TACGAATTTC AGAAACAACA AGATCAAGCT TCAGCCAGAA GATGCCGCGA AGGATAATCA ACGGTTCCTC ACAGAGATGA GAAGAAGAGG TGTAGACGAT CCGAGCAGAA AGCTTCTATA TGGCTTTTTC CATCCGTATG CCAATAATGG TGGTGGTGGT GAAAGAGTGT TGTGGCAGGC TGTTGGAGCT ACACTAGAAG CCAATGTCAG AAATATCGCT GTAGTGTATA CCACCAATAT TGAAGCAGAA CCGCTTCAGA TTTTGCAAAA GGCTGAGGAT AAGTTTCAAG TAAGTGGTTT AGATTCTTCA AGAATCGTTT TTATATATTT GCGTAGGTTT GGTCATTTGA TAGATGGTGC TTACTGGAAG CATTTCACAC TAATTGGCCA ATTGGTGGGA TCTATGTTAC TTGGGCTTGA AGCCTTGTTT GAACTCACTC CCGATATCTG GATTGACACC ATAGGCTTAC CCGGAAGTTA TTTGTCAGTA ACATTCATAT TGAGACTTCC TATTCTTGCC TATGTTCATT ATCCCATCAT CCAATCAGAC ATGTTCAATA AATTGAAGTT TAAGGCGTTC ACCACGGCCG AGTTTGGGGA GTTTAACTTC AGTGCCAGAG ACTTTGTAGA AGCTGGCAAG TTTGTTTACT GGTCTATGGT GTACTACTTC TATGTGTATT TGGGCTCTAC GGTAGATGTG ACATTAGCCA ATGGCACTTG GACATTCAAT CATATCTCCA ACATCTGGTC TTTCAACCGT ATCTTGGGCC ACAAGTTGGA AAAGTTGTAT CCTCCTTGTG GAACAGAGAC GTTGACTAAG GAAGTGAATC TTGAACAAAA GAGAGAAAAC AAATTGTTGT ATATTGCCCA GTTCCGTCCC GAGAAAAGAC ACTCGTTGTT TGTAGACGAA TATGCGCAGT TTTTGAAAAA GAACTTTGCC AACGTCAAGG CTGACGATGC TGATATTCCC AAGTTGGTGT TTCTCGGTTC ATGTAGAACT GCTGACGATA CTGCAACTTT GCACTTGATT CAAAGCAAAG TCGAGAAGGC TGGATTACAG GATTATGTTG AATTTATTGT TGACTGTTCA TATGACGAAG TTGTCGACCA GCTTTCCCGA GCCAAGTTTG GTTTGAATGC CATGTGGAAC GAACACTTCG GAATAGGTGT AGTTGAATAT TTGGCTCGTG GCGTGGTTCC GTTGGTACAT GCCTCAGCAG GTCCATGGTT GGATATTGTT ACGGGCTGGA ACGATGAAGA AAACAAGCTC AATTGGCACA ACAACTCTGG CTTCTTTTTT AAAAGCATGG ATGATCCTGA TTTTGATCCT TCCGTTCAAG AAGAAACTGA AGAGGGATTC ATTACTTTTA ATGTAGAAAT CGAGCAAGGG GAGGTACAGA GAGCTCAATA CCCTAGTTTC TCGGGATTGC TCTACCACAT CTTTGTCAAG TCACCAGAGT TGGTTTCTGA CAAACGGTTG GACGAAATGA GACACAACGG GTTGAGGTTG GTGAAGGAGA AATTTTCCAA TGGAGTTTTT AGTGAAAGCT GGAAGAAGTA CGTAGGTGAA CTCGAGGAGT TGGAGGTGGA CTACCGTTCC GAGAAGGACG ACGTGGTGCA GGTGTATTGA TAATAAGAAT AATGTATATA TAAGATATTT CCAATGTATA AAGAAGTTTC
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Protein sequence | MVVFVVYKSF TSVLPHYFVV PHQNWRERIA KVIKHDKPIY LNVGYKRSSY RRRLILASIQ PSFYTNFRNN KIKLQPEDAA KDNQRFLTEM RRRGVDDPSR KLLYGFFHPY ANNGGGGERV LWQAVGATLE ANVRNIAVVY TTNIEAEPLQ ILQKAEDKFQ VSGLDSSRIV FIYLRRFGHL IDGAYWKHFT LIGQLVGSML LGLEALFELT PDIWIDTIGL PGSYLSVTFI LRLPILAYVH YPIIQSDMFN KLKFKAFTTA EFGEFNFSAR DFVEAGKFVY WSMVYYFYVY LGSTVDVTLA NGTWTFNHIS NIWSFNRILG HKLEKLYPPC GTETLTKEVN LEQKRENKLL YIAQFRPEKR HSLFVDEYAQ FLKKNFANVK ADDADIPKLV FLGSCRTADD TATLHLIQSK VEKAGLQDYV EFIVDCSYDE VVDQLSRAKF GLNAMWNEHF GIGVVEYLAR GVVPLVHASA GPWLDIVTGW NDEENKLNWH NNSGFFFKSM DDPDFDPSVQ EETEEGFITF NVEIEQGEVQ RAQYPSFSGL LYHIFVKSPE LVSDKRLDEM RHNGLRLVKE KFSNGVFSES WKKYVGELEE LEVDYRSEKD DVVQVY
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