| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_82941 |
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| Symbol | PRP39 |
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| ID | 4838138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | - |
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| Start bp | 822386 |
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| End bp | 824525 |
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| Gene Length | 2140 bp |
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| Protein Length | 707 aa |
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| Translation table | 12 |
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| GC content | 36% |
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| IMG OID | 640389453 |
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| Product | pre-mRNA splicing factor |
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| Protein accession | XP_001383792 |
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| Protein GI | 150864815 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.630314 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CAAATTATAG TCCAAGATGT CCCATATAAA TTTTAGGTTC CACCAAGATT TGAATTTAGA
CGCAATTTCC TTTGGCGGAG CTTCCAAATC TGATGCAGAA GTCAAAGAAG TAGACAACTT
AGACAAGCTC CATAATGATA TTCGAAGGAG CCCCAATGAT CTCACCAAAT GGGATAAGCT
CTTTCAGCTG TTTGAGAGGA CATTCACAGT GAAATTTGAA GGCAAGCCTG ACAAAGTTTC
GACCCAATTC AAGCTCTTAG TGACAAAAAC ATATGCTTCA TTACTTTCTA GATTTCCATA
TTTGGCTTCT TACTGGAAAT CATGGCTGAT TTTTGCATTC AAACTCAGTG GTACCAAAGA
GTCAATCGAG GTACTAGAGA AGTCTGTAAT TGGATTTCCT TATTCGGTTG AATTATGGAC
AGACTATATC AGTGCTTTGA TCTTAACATA TGGGAACGAT CCAGAGAAGT TGAGTTTTAT
CAGAGCCCAA TATAGTGAGG CACTTCGTTT AAATGGATTA AATTTTCTAT CTCATCCATT
ATGGGATAAA GTGATTGAAT TTGAAACTGG AATTGGCGAA AAATCAGTTA TAGTAGGATT
ATATCTCAGA GTCACCAAGA TTCCACTTTA TCAGTATGCT CAATACTACA ATAGCTTTAC
ACAAATCAAT AAGAATTACG ATATTACGGA TGTGATACCT TCTCTTGAGT TGGCTGAATA
TGTGAAAAGA TTCAACAAGA CAGATGTTAC TGAATTGACT CTTGGTGAAA AGAATCAAGT
TGTAGATGAT CACACTGACA TTATCTTTAC ATCGACTCAA GAACAGGTGA CTGATAAATG
GTCTCATGAG TCGTCTATAT TCATTCATGA TTTCTCTCTT GACAGGCTCG ACGAAATTGC
GAAGGAAAAG GAAATATGGA TCAAGTACTT GGATCACGAG ATTTCCAAGT ATAAAGTAAG
CCTGGCCATA GATCAATTTG ATAATGTAGC AAATATTTTT GAGAGAGCAC TAGTACCCAA
CTATTACAAT GAAGGAATAT GGCTCAAGTA TCTTGCTTTT ATCAACATCC TGGAATTGGA
AGATGAAGTC AAATACGAGA AAGCTAAAGC TATTTACCTA AGAGCAATTT CAGGTTTACC
AGTAGAAAGT ACTGTTCTTA GATCTTTGTA CCCGAAGTTT CTTATGAAGT ACAAGCATTT
AGACATTGCC AAGAGCTACT TATACGATTA TTTGAAGTTG TTTGGAGGTC GTGGAAATAG
ATACTTCAAA CTGCAGTATC TACAAACAGT CCAAGACACA GTAGAGGTTT GGGAGAAATC
AGAGAATAGC AAAGATTACC TTGCAAAATT GCAGACTATT GTTGACGAAT ATTTCTCTTT
ACACAATGCA AAGTCAATAA AAAAGGATAG CAAGGGAGTA AAAGGTGAAT CTGCAGATGC
GTTGTTTGTT TTGAATTTGC TTAATGATGA AGCTATCACT ATAATCACTG TTGCGTATTT
GAAGGAATTG TATGCTCAGA CAGATTCAGT ATCGAGAATT AGGGAAATGT TCAATTTATT
ATACAAAGAA AATGCTTTCA AAAAATCTGT TTTGTTTTGG AAATACTTCT TGAATTTTGA
AAGATTACAC GGACAAACCC TTCACAACTT GAGAATGATA ATAAATTATG TCAAAACTGA
AACTCAACTT CCCAAAGCTA TTGTAGATGC TTTCATCACA ATCGAATATG ATATCATTGG
CGCAAATTTG GACTCGGCTG TTGAACAGCA TAGAGCAGGA GTCCCTAGAT CATCATTAGA
AGATTTAATA AAGAAGGATA TGGAAACGTC ACTTTCCTTA ATTCGTAATG CCTCCGCCAG
AAAAAGGCTA GCCAATTCTA ATTATATTGT TAAAGACGCT GAAGATTTGA AGTCTGCTCA
CAAGACAAAT TTCAACAGGG AAGCAGAGCT TTTAAAGATC ACCAGAAAGC ACATTGGCCA
TCCAGGAATA TTGATCGATG CTATTCCTGA TATAACCAAC AAGTTCATGA AGGAAGGAAA
CGATGTTTCT TTGCTAGACT CAAAGCTTGT TGTACCTTCG TTTCCAACAT TTAAAAATGC
CGAAAAGGCG AATGCATCGA TCAACTATCC AAAAGCATAA
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| Protein sequence | MSHINFRFHQ DLNLDAISFG GASKSDAEVK EVDNLDKLHN DIRRSPNDLT KWDKLFQSFE
RTFTVKFEGK PDKVSTQFKL LVTKTYASLL SRFPYLASYW KSWSIFAFKL SGTKESIEVL
EKSVIGFPYS VELWTDYISA LILTYGNDPE KLSFIRAQYS EALRLNGLNF LSHPLWDKVI
EFETGIGEKS VIVGLYLRVT KIPLYQYAQY YNSFTQINKN YDITDVIPSL ELAEYVKRFN
KTDVTELTLG EKNQVVDDHT DIIFTSTQEQ VTDKWSHESS IFIHDFSLDR LDEIAKEKEI
WIKYLDHEIS KYKVSSAIDQ FDNVANIFER ALVPNYYNEG IWLKYLAFIN ISELEDEVKY
EKAKAIYLRA ISGLPVESTV LRSLYPKFLM KYKHLDIAKS YLYDYLKLFG GRGNRYFKSQ
YLQTVQDTVE VWEKSENSKD YLAKLQTIVD EYFSLHNAKS IKKDSKGVKG ESADALFVLN
LLNDEAITII TVAYLKELYA QTDSVSRIRE MFNLLYKENA FKKSVLFWKY FLNFERLHGQ
TLHNLRMIIN YVKTETQLPK AIVDAFITIE YDIIGANLDS AVEQHRAGVP RSSLEDLIKK
DMETSLSLIR NASARKRLAN SNYIVKDAED LKSAHKTNFN REAELLKITR KHIGHPGILI
DAIPDITNKF MKEGNDVSLL DSKLVVPSFP TFKNAEKANA SINYPKA
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