| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_82779 |
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| Symbol | RAD23 |
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| ID | 4838295 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | - |
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| Start bp | 818254 |
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| End bp | 819740 |
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| Gene Length | 1487 bp |
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| Protein Length | 366 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640389610 |
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| Product | nucleotide excision repair protein (ubiquitin-like protein) |
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| Protein accession | XP_001383791 |
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| Protein GI | 150864814 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00601] UV excision repair protein Rad23 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | CCACCGTTGA ATTGACCCCG TGCACTGTTT TCGTAATGCA AGTGATTTTC AAGGATTTCA
AGAAACAGAA AGTGCCCTTG GAGGTCGAGT TGACCGACAC TGTATGTATA TGAAAGATAG
AGACTTACTG AAATTTTGCA GAGAGACGTG AATATTTCGT TGAGAGGAAC ACAATTTGGT
TGGTTAGATT GAGGATTGGC TGATATAGGG ATTCAAATTA CTTATTAAAT GAATGGTTTT
ATAAAGACTC ATAATTTGCT TCCAAATTTT ATCAAATATA AAATATCTAA CACCAACGCG
ATTATATCAG CGCATTAAAT GAAAATCTTC ATTTGTTAAT TTATTTCAAC TTTCGGTAGT
TGTCAATGTC AATAATAGTT GCTTTTACTA ACGCTCTTCA GGTGTTGGCG ACCAAGGAAA
AACTCGCTGC CGAAAAGGAC TGCGAAGCCC CGCAATTAAA GTTCGTCTAC TCCGGTAAAG
TGTTACTGGA CGAAAAGACT TTGGAGGAGT TTAAGATCAA GGAAGGCGAC TCGATCATTT
TCATGATATC CAAGGCTAAA AAGACTCCTA CGCCTGCTCC TGCTGCTGCG CCAATTACGA
CAACATCTTC CGAACAGTCA TCTGCCACCC CTGGATCTAC CACTGCCACC ACTACTACTG
GTAATGCTGA GGGTTCTACC GACTCTGGTA TTTCTTCTGG AAATGCACCA GAACCAGAAG
CAGCTGCACC AGAATCTTCT ACAACTTCGG AACCAAGTTC TACTTTTGCC CAAGGCTCAG
AGCGCGAAGC TAGCATTCAG AACATTATGG AAATGGGATA TCAAAGAGCC GAAGTTGAAA
ATGCATTGAG AGCAGCTTTC AACAATCCTC ATAGAGCCGT AGAGTATCTC TTGACTGGAA
TTCCGCAATC TTTGCAACGT CCGGAAGTGC CAGCCGCCGT AGCTCCTGTA GCTGACTCAA
CTCACGAAGA GTTGGCGCAG GATCACGACA TTGACGATGG CGAAGAACAG GGTGAAAACT
TGTTTGAAGC TGCCGCAGCC GCCCAGGCCA GAAGCCAAGG GGCTGGTGCC GTAGAACAAC
CGGCAACTGG TGGAGGATTA GCGGAAATGG GCGACGATGA ACAGATGAAC TTGTTGAGAG
CATCGTTGCA ATCAAACCCC GAGTTGATCC AGCCTATTTT GGAACAATTG GCCCTGTCCA
ATCCCCGAAT CGCTACTTTG ATTCAGCAAG ACCCAGAAGC GTTTATCAGA ACATTTTTGG
GAGCTGGTGC CGACGAATTG GGATACGAAA TAGAAGGCGA TGACGGAGCT GAAGGAGCTG
ACGCTACCGG CCAACAGCCA ATTCGTATTC CCTTGACAGA ACAAGACCAG AATGCAATTG
AAAGATTGTG CGAGTTGGGC TTTGAACGTG ACTTGGTGAT CCAGGTTTAT TTGGCCTGCG
ACAAGAACGA GGAAGTAGCT GCTGACATCT TATTTAGAGA TATGTAA
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| Protein sequence | MQVIFKDFKK QKVPLEVELT DTVLATKEKL AAEKDCEAPQ LKFVYSGKVL SDEKTLEEFK
IKEGDSIIFM ISKAKKTPTP APAAAPITTT SSEQSSATPG STTATTTTGN AEAAPESSTT
SEPSSTFAQG SEREASIQNI MEMGYQRAEV ENALRAAFNN PHRAVEYLLT GIPQSLQRPE
VPAAVAPVAD STHEELAQDH DIDDGEEQGE NLFEAAAAAQ ARSQGAGAVE QPATGGGLAE
MGDDEQMNLL RASLQSNPEL IQPILEQLAS SNPRIATLIQ QDPEAFIRTF LGAGADELGY
EIEGDDGAEG ADATGQQPIR IPLTEQDQNA IERLCELGFE RDLVIQVYLA CDKNEEVAAD
ILFRDM
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