Gene PICST_81735 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_81735 
Symbol 
ID4837354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp1717882 
End bp1719033 
Gene Length1152 bp 
Protein Length367 aa 
Translation table12 
GC content41% 
IMG OID640388669 
Productpredicted protein 
Protein accessionXP_001383095 
Protein GI126133140 
COG category[R] General function prediction only 
COG ID[COG1163] Predicted GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CAGTTCGAGA TGACGACAGT GGAAAAGATC AAGGCCATCG AAGATGAGAT GGCCAAGACT 
CAAAAAAACA AGGCTACATC TTTCCATTTG GGTCAGCTTA AAGCGAAGTT GGCAAAATTG
AGAAGAGAGC TCTTAACTGA TGGTTCCTCT GGAGGTGGAG GTGCTGGTAT CGGTTTCGAT
GTAGCTCGAA CTGGTGTGGC GACTATTGGG TTTGTTGGCT TCCCTTCTGT GGGTAAGTCG
ACGCTTTTAA ATAAGTTGAC TGGTACCCAT TCAGAAGCAG CTGCATATGA ATTCACAACC
TTAACTACAG TTCCTGGGAC AATCAAGTAT AAGGGTGCCA AAATCCAAAT GTTGGATTTG
CCAGGTATTA TCGAAGGCGC TAAAGATGGT AAAGGTAGAG GTAGACAGGT TATTGCTGTT
GCACGTTCTG TGAATTTACT TTTCTTGGTA TTGGATGTGA ACAAACCTTT GCAACACAAG
AGAATCATCG AACATGAATT AGAGGGAATG GGTATAAGAA TCAACAAGGA ACCTCCCAAC
ATTGTAATAC AGAAGAAAGA GAGAGGAGGC ATCAATATCA CAAACACTGT GCCTTTGACC
CACTTGGACA ATGACGAAAT TAGAGCAGTT ATGTCAGAAT ATAAGATTAA CTCAGCAAAC
ATTGCTTTCA GATGTGACGC TACTGTTGAT GACTTAATTG ATGCTATCGA AGCCAAAGCA
AGAAGATACA TTCCTGCTAT CTACGTCTTG AACAAAATCG ACTCTTTTTC CATTGAGGAA
TTGGACTTGT TGACCAGAAT TCCCGACGCC ATTCCAATCT CATCAGGCAA TGGCTGGAAC
TTAGACGATC TTCTTCAAAT GATGTGGGAC AAGCTCAAAT TGGCCAGAGT GTATACAAAG
CCTAAGGGTA AATTACCTGA CTTCAGTGAA CCAGTTGTTT TGAGAAGTGA TAGATCTACA
GTAGAGGACT TCTGTAACTC TATTCACAAG TCATTGGTCG AAGACTTCAG AAATGCTTTG
GTTTACGGAA CGTCAGTGAA GCATCAACCT CAAATTGTTG GTCTCAGTCA CACACTTGAA
GATGAAGATG TAATTACAAT TTTGAAGAAG TAAATAATTG GGGTCGTAAG ACGGTGCATA
GTATACAATA AG
 
Protein sequence
MTTVEKIKAI EDEMAKTQKN KATSFHLGQL KAKLAKLRRE LLTDGSSGGG GAGIGFDVAR 
TGVATIGFVG FPSVGKSTLL NKLTGTHSEA AAYEFTTLTT VPGTIKYKGA KIQMLDLPGI
IEGAKDGKGR GRQVIAVARS VNLLFLVLDV NKPLQHKRII EHELEGMGIR INKEPPNIVI
QKKERGGINI TNTVPLTHLD NDEIRAVMSE YKINSANIAF RCDATVDDLI DAIEAKARRY
IPAIYVLNKI DSFSIEELDL LTRIPDAIPI SSGNGWNLDD LLQMMWDKLK LARVYTKPKG
KLPDFSEPVV LRSDRSTVED FCNSIHKSLV EDFRNALVYG TSVKHQPQIV GLSHTLEDED
VITILKK