Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_81572 |
Symbol | |
ID | 4837036 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 2625954 |
End bp | 2627808 |
Gene Length | 1855 bp |
Protein Length | 457 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640388351 |
Product | predicted protein |
Protein accession | XP_001382735 |
Protein GI | 150864051 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0406] Fructose-2,6-bisphosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.526863 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TCCACTTTTG CATACAATCA ACTCTAGCCA GACAGAACGA GAACGGGCAG TGTCGGGTTT CGAACGAACG TAGACACATC AGTGGGAACC ATCTCGTTGC TAGAAAGCTC GTATTCCTGT TGTTACATAC TGGGTGTTAG GAGCTAAACC ATAGAAGACA CGGTACTCAA TATAGTACAC TAAATAGCAT TTGTTCTTGC CACAGCTTCA TTCCACTGAT AACTGATAAC ATTGCTTCAA TTGTTGAAGT TATTACCATA GGTTGCAGTG TGGCTTTCAT TCGTCGATAA CGGGAAAGAA TTGTACGAGA AACCCATTGC TTACATAGAC GTTTCAGTTC GCCTTGTTCG TGTAGCCGTT GAAATTTTGA ATCGTCTTTG CTCCTAATCT TTCTCAATTA TTCACACAAG TTTCATACAC ACAAGTTATA TGGATGTCTG AGCTTTACTT CTTGCGACAC GGTCAGCGAA TAGACCATGC TCCAGCAGGA TCCAAATCGT TGGCTACAGA GTACCAGAGC TATGATCCAT CGCTTTCACG AGATGCCGAG GCTCAAATCG AAGAGCTTAC ATCAGAAATC CTCGACATCA CCCGAGCTTT CTCTGATAAA TGCACTTCCA GACGTAAGAA CATCTTTGTC CATTTCAGTC CGTATTTGCG ATGCTGCCAG ACGGCTGATC TCATAGTTTC TGAACTCAAG CTCCTTCTTC CAGAGAAGTA CCCAGATTTC AATGTTAAGT ACCAATTGCT CTGTGACTTT GCTCTCAGTG AGTGGATCCA TGATAAAATG AAAAACAAGC CACCGTTTGT CGACTCCAAT GAAGCGTACC AGATGTATAC CCCGAATTTG AAGCTTTTGA AGAATCGTTC CAACTGCTCT AACTTTAGAC CTACCACTAC TCTTGGGCCA TATAATGGAC CAGATCTAAG CTACAGAGAT TACCAGTCTC GATGTAAGGA CTATTTCAAA CGACTTCTAG CCACTTACGA AAAGGGCTCG TATATCGAGA ATAGGGATAT CATCATTGTA GTGTCCCACG GCTATGCAAT AAACAACTTC TTGTCTTATT TCATAAGCCA TCCAATTTTC GATGAAATAC CCGAAGCTAA AATTAATCTT GCAAGAAGAG TACACTACAG TGAAGCGGAT GATGATGAGA GTATGGAAAG TAGCGAAAAT AATGAAGATG AGGATGATGA TGAAGAGGAA GAAGAATTTG ATCAAGAAGA TTATACCTGG AAACTAGTGA AAGATGCCAT GAATATGGCA GATGGAAGTC TGGACACGAC GTTAAATCTA GAAACTGATA TCGTTTATTA CAAAACAAAC TTCATAAAGA GAGACGAACT TGCAACGGAA ATGGCCAACT CAAGCAGCAG ACAGACAACA ACGGCTGTTG TCAAACCGCG TGCTTCTTTC AAGATTGAAA ATGATACGAA GAAGCCAAGG AATCCGATTT GTCTTGCGGC CAAGAACTGG GATGTGACAA CTGCTAACAA GTTCAAGATA AGGGCGGAGT TCCAGTTGAA ACACATGAAC GACGAATCGT TCAGGAAGGA TTTCGATTTG AACAAACGTC CTTCAAAGCC CGTAAGTCCT GAAATCTCAC CAAACTCGGA GCCTACTCGT AATAATTCCT TGGTGGACTT GTCGAAGTTG TTGTCTAATG AAGAAATATA TAAGCCATTC AAAACAAAGT ATTCCAATGC TTTTGAGATT CCCATTCACA AGTTGAACTC TAAAGTTAAC TCTCAAGTGA ATCTTGCGCA ATACCAGAGG GAGTACCATT CTTCTAACGA TGGCTCATAT ATTGATTTAG CTAAGTTAAG TGCAAACGCT AAAGCTTCAC GAAAG
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Protein sequence | MSELYFLRHG QRIDHAPAGS KSLATEYQSY DPSLSRDAEA QIEELTSEIL DITRAFSDKC TSRRKNIFVH FSPYLRCCQT ADLIVSELKL LLPEKYPDFN VKYQLLCDFA LSEWIHDKMK NKPPFVDSNE AYQMYTPNLK LLKNRSNCSN FRPTTTLGPY NGPDLSYRDY QSRCKDYFKR LLATYEKGSY IENRDIIIVV SHGYAINNFL SYFISHPIFD EIPEAKINLA RRVHYSEADD DEKEFDQEDY TWKLVKDAMN MADGSSDTTL NLETDIVYYK TNFIKRDELA TEMANSSSRQ TTTAVVKPRA SFKIENDTKK PRNPICLAAK NWDVTTANKF KIRAEFQLKH MNDESFRKDF DLNKRPSKPV SPEISPNSEP TRNNSLVDLS KLLSNEEIYK PFKTKYSNAF EIPIHKLNSK VNSQVNLAQY QREYHSSNDG SYIDLAKLSA NAKASRK
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