Gene PICST_81572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_81572 
Symbol 
ID4837036 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp2625954 
End bp2627808 
Gene Length1855 bp 
Protein Length457 aa 
Translation table12 
GC content41% 
IMG OID640388351 
Productpredicted protein 
Protein accessionXP_001382735 
Protein GI150864051 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.526863 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TCCACTTTTG CATACAATCA ACTCTAGCCA GACAGAACGA GAACGGGCAG TGTCGGGTTT 
CGAACGAACG TAGACACATC AGTGGGAACC ATCTCGTTGC TAGAAAGCTC GTATTCCTGT
TGTTACATAC TGGGTGTTAG GAGCTAAACC ATAGAAGACA CGGTACTCAA TATAGTACAC
TAAATAGCAT TTGTTCTTGC CACAGCTTCA TTCCACTGAT AACTGATAAC ATTGCTTCAA
TTGTTGAAGT TATTACCATA GGTTGCAGTG TGGCTTTCAT TCGTCGATAA CGGGAAAGAA
TTGTACGAGA AACCCATTGC TTACATAGAC GTTTCAGTTC GCCTTGTTCG TGTAGCCGTT
GAAATTTTGA ATCGTCTTTG CTCCTAATCT TTCTCAATTA TTCACACAAG TTTCATACAC
ACAAGTTATA TGGATGTCTG AGCTTTACTT CTTGCGACAC GGTCAGCGAA TAGACCATGC
TCCAGCAGGA TCCAAATCGT TGGCTACAGA GTACCAGAGC TATGATCCAT CGCTTTCACG
AGATGCCGAG GCTCAAATCG AAGAGCTTAC ATCAGAAATC CTCGACATCA CCCGAGCTTT
CTCTGATAAA TGCACTTCCA GACGTAAGAA CATCTTTGTC CATTTCAGTC CGTATTTGCG
ATGCTGCCAG ACGGCTGATC TCATAGTTTC TGAACTCAAG CTCCTTCTTC CAGAGAAGTA
CCCAGATTTC AATGTTAAGT ACCAATTGCT CTGTGACTTT GCTCTCAGTG AGTGGATCCA
TGATAAAATG AAAAACAAGC CACCGTTTGT CGACTCCAAT GAAGCGTACC AGATGTATAC
CCCGAATTTG AAGCTTTTGA AGAATCGTTC CAACTGCTCT AACTTTAGAC CTACCACTAC
TCTTGGGCCA TATAATGGAC CAGATCTAAG CTACAGAGAT TACCAGTCTC GATGTAAGGA
CTATTTCAAA CGACTTCTAG CCACTTACGA AAAGGGCTCG TATATCGAGA ATAGGGATAT
CATCATTGTA GTGTCCCACG GCTATGCAAT AAACAACTTC TTGTCTTATT TCATAAGCCA
TCCAATTTTC GATGAAATAC CCGAAGCTAA AATTAATCTT GCAAGAAGAG TACACTACAG
TGAAGCGGAT GATGATGAGA GTATGGAAAG TAGCGAAAAT AATGAAGATG AGGATGATGA
TGAAGAGGAA GAAGAATTTG ATCAAGAAGA TTATACCTGG AAACTAGTGA AAGATGCCAT
GAATATGGCA GATGGAAGTC TGGACACGAC GTTAAATCTA GAAACTGATA TCGTTTATTA
CAAAACAAAC TTCATAAAGA GAGACGAACT TGCAACGGAA ATGGCCAACT CAAGCAGCAG
ACAGACAACA ACGGCTGTTG TCAAACCGCG TGCTTCTTTC AAGATTGAAA ATGATACGAA
GAAGCCAAGG AATCCGATTT GTCTTGCGGC CAAGAACTGG GATGTGACAA CTGCTAACAA
GTTCAAGATA AGGGCGGAGT TCCAGTTGAA ACACATGAAC GACGAATCGT TCAGGAAGGA
TTTCGATTTG AACAAACGTC CTTCAAAGCC CGTAAGTCCT GAAATCTCAC CAAACTCGGA
GCCTACTCGT AATAATTCCT TGGTGGACTT GTCGAAGTTG TTGTCTAATG AAGAAATATA
TAAGCCATTC AAAACAAAGT ATTCCAATGC TTTTGAGATT CCCATTCACA AGTTGAACTC
TAAAGTTAAC TCTCAAGTGA ATCTTGCGCA ATACCAGAGG GAGTACCATT CTTCTAACGA
TGGCTCATAT ATTGATTTAG CTAAGTTAAG TGCAAACGCT AAAGCTTCAC GAAAG
 
Protein sequence
MSELYFLRHG QRIDHAPAGS KSLATEYQSY DPSLSRDAEA QIEELTSEIL DITRAFSDKC 
TSRRKNIFVH FSPYLRCCQT ADLIVSELKL LLPEKYPDFN VKYQLLCDFA LSEWIHDKMK
NKPPFVDSNE AYQMYTPNLK LLKNRSNCSN FRPTTTLGPY NGPDLSYRDY QSRCKDYFKR
LLATYEKGSY IENRDIIIVV SHGYAINNFL SYFISHPIFD EIPEAKINLA RRVHYSEADD
DEKEFDQEDY TWKLVKDAMN MADGSSDTTL NLETDIVYYK TNFIKRDELA TEMANSSSRQ
TTTAVVKPRA SFKIENDTKK PRNPICLAAK NWDVTTANKF KIRAEFQLKH MNDESFRKDF
DLNKRPSKPV SPEISPNSEP TRNNSLVDLS KLLSNEEIYK PFKTKYSNAF EIPIHKLNSK
VNSQVNLAQY QREYHSSNDG SYIDLAKLSA NAKASRK