| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_81459 |
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| Symbol | HAS1 |
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| ID | 4836874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 861927 |
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| End bp | 863852 |
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| Gene Length | 1926 bp |
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| Protein Length | 567 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640388189 |
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| Product | RNA-dependent helicase |
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| Protein accession | XP_001382401 |
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| Protein GI | 150863803 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.3042 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TGTTGATCTC AGTTCAAACT GCATATATTC CGAGTAGCTC GTGAGAAAAC ACGTGAGTGA
TATCATGCGC ACGATGAGAT GGGCAGCTCG AAAAAATTCC AATCTCCATA CAAAATATAT
TTGTAGATTT TTCACGTAAA CTATATATCC GTTTCATATC CAGCAGAATC AAGCAAAACA
TGGCCAAAAA CGTCAACTCT AAGGCCAACG GCAAGAAGAG TGGTTCTGTC AAAAGAGCTT
TGAAAGAAAA GAAACAGCCT GAGCCGGAAT TTTCGGATTC TGAAGATGAT GAAGTCGACC
AGGAAAAGCT AGTTGAAGAA TTAGATGAAG ATTTCGACGA GGTAGCCAAT ATGCTTGGTG
CTGATGTGAC CGATCCCGAA GAAAAGAAAC AATCCAAGCT TGAAAGAAAG AGAAAGAGAG
ACGAGGAGGC TACTGCAGAA TATACTAAGC CAGAAGTTGT AGATAATGAA GATGATGCTC
AAAACGACAA GTTTGAAGAT GCCGGATTAT CTGAGCCCAC CATGAGGGCC ATTCTGGACA
TGGGATTCAA GACAATGACT AAGGTGCAAG CCAAGACTAT TCCACCATTG TTGGCTGGAA
AAGATGTATT GGGAGCTGCT AAGACTGGGT CTGGTAAGAC GTTAGCATTC TTGATTCCTG
CCATAGAACT TTTGTACTCA TTGAAGTTCA AGCCTAGAAA TGGAACTGGT GTCATCGTCG
TTTCTCCTAC AAGAGAATTA GCATTACAAA TCTTTGGAGT TGCCAGAGAG TTAATGGCCC
ACCATACACA GACGTTTGGA ATTGTAATTG GGGGTGCCAA CAGAAGACAG GAAGCCGAAA
AGTTGGCTAA GGGTGTCAAC TTGTTGATCG CTACCCCAGG AAGATTGTTG GATCATTTGC
AGAACACACA GGGATTTGTA TTCAAGAACT TGAAGGCTTT GGTTATCGAC GAAGCTGATA
GAATTTTGGA AATCGGGTTC GAAGAGGAAA TGAAACAGAT CATCAAAATT TTGCCTAAGG
AAGAAAGACA ATCCATGTTG TTCTCGGCTA CGCAGACTAC CAAGGTGGAA GACTTGGCCA
GAATCTCATT GAGACCTGGT CCATTGTATA TAAATGTAGT ACCGGAAACG GCAGCATCTA
CAGCTGATGG CTTGGAACAG GGTTATGTAG TATGTGATTC CGACAAGAGA TTCTTGTTGT
TATTCTCGTT CTTGAAGAAA TACTCCAAGA AGAAGATCAT TGTGTTTCTT TCTTCTTGTA
ACTCAGTCAA GTACTTCGGT GAGCTCTTGA ACTACATCGA CTTGCCAGTA TTGGATTTGC
ATGGTAAACA GAAGCAACAG AAGAGAACCA ACACCTTCTT TGAATTCTGT AACGCCAAAC
AAGGAACTTT GGTGTGTACT GATGTAGCAG CTAGAGGCTT GGACATTCCA GCCGTCGACT
GGATCATCCA GTTCGATCCT CCTGATGATC CAAGAGACTA TATCCACAGA GTCGGTAGAA
CAGCCAGAGG CTCGAATGGT AAGGGTAAGT CGTTGATGTT CTTGACTCCA TCCGAATTGG
GCTTCTTGAG ATACTTGAAG GCTGCTAACG TTCCTTTGAA CGAATACGAA TTCCCCACCA
ACAAAATCGT CAATATCCAG TCACAATTGT CGAAGTTAAT AAAGAGTAAC TACTGGTTGC
ACCAATCAGC CAAGGATGGC TACCGTTCAT ATCTTCAAGC ATACGCTTCT CATCACTTGA
AGACGGTGTA CCAAATCGAC AAATTGGATT TGGTCAAGGT GGCTAAGTCG TTTGGTTTCG
ATGTTCCCCC TAAGGTGAAC ATTACTATCG GAGCCAGTGG AAAGTCAATA GAAAAAAAGC
ATAAGAAGCA AAAGAGAGCT TAGGGTAGAT AAATAGAAAG CATAATCCTG AATGTACATT
AGATAG
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| Protein sequence | MAKNVNSKAN GKKSGSVKRA LKEKKQPEPE FSDSEDDEVD QEKLVEELDE DFDEVANMLG
ADVTDPEEKK QSKLERKRKR DEEATAEYTK PEVVDNEDDA QNDKFEDAGL SEPTMRAISD
MGFKTMTKVQ AKTIPPLLAG KDVLGAAKTG SGKTLAFLIP AIELLYSLKF KPRNGTGVIV
VSPTRELALQ IFGVARELMA HHTQTFGIVI GGANRRQEAE KLAKGVNLLI ATPGRLLDHL
QNTQGFVFKN LKALVIDEAD RILEIGFEEE MKQIIKILPK EERQSMLFSA TQTTKVEDLA
RISLRPGPLY INVVPETAAS TADGLEQGYV VCDSDKRFLL LFSFLKKYSK KKIIVFLSSC
NSVKYFGELL NYIDLPVLDL HGKQKQQKRT NTFFEFCNAK QGTLVCTDVA ARGLDIPAVD
WIIQFDPPDD PRDYIHRVGR TARGSNGKGK SLMFLTPSEL GFLRYLKAAN VPLNEYEFPT
NKIVNIQSQL SKLIKSNYWL HQSAKDGYRS YLQAYASHHL KTVYQIDKLD LVKVAKSFGF
DVPPKVNITI GASGKSIEKK HKKQKRA
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