Gene PICST_81261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_81261 
Symbol 
ID4851734 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp2687468 
End bp2688977 
Gene Length1510 bp 
Protein Length218 aa 
Translation table 
GC content43% 
IMG OID640393442 
Productpredicted protein 
Protein accessionXP_001387082 
Protein GI126275425 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.124697 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATTCACAGAA ATCAACAAAT CCACACCAAA ACACCCACAA ATACTTTAAA AATGTCTTCA 
TTGGATAAAT CTTTAGATGA CATCATCTCT TCCACGAAGA GACCAGCCAG AAAGTTCGCC
AGGTCTACCA AGACCAACAA GGTGGGCAAG AAGGTCGGCG CCGCAAGCAA GAAGACTATT
GTCTCATTTA AGAAGGCTGC TCCCGCTGCT GCTGCTGCCA AGGTTAGCGT TGACTTGTCC
TACGCTACCA AAGTTGTTGT TTCCGGTTTG CCTAAGGACT TGAAGCAGGA CAACATCAAG
GTATGTTGAG TTTGAAAACT CACACGGAGT ATTTTTATAT CGATATTCTG CGAAAAAGAA
GAGGGCCAGC TGGGTCTGAC ACGTCACGTT TGATAATTTG ACGTATCACC AGATATAGCT
CTGGAAGTCT CTACGAATAG GAGACTGAGT GGGTCTGCGT TATTTATCAT TCTATTTCTC
ATTTCTATTT TTGAGGGAGG TTGAGTACAA CAAAAAACGG AACTAGATCG AACAAGAGCA
CACGAGAGAG AAGTACAAAA GCTTTGTGCT GGCACAAGCG GATGCTCCAT AGTGATTTAT
GGCTTCCAAA CTTGATCTCT TGCTCTATTC ATATGAATTG AATAGTTCGT CTGTTTCACC
ATAACAAACT TGAATTTTCT CGTAGGTTCA GTTTTTGCTA TGGTTAATGT TCGGAACGAT
CGGTCATTTT CTACAAGTGG ATTTGTTAGA AATTTGTGTT AGCCGCCAAT ATATTTCTTG
AAATGACAGA AGTCGATAGA ATCATAGGGA CTGGATGTAT TAGCTTACTA TTCTCCCAAT
GATTCGACCT CGCCGATCAC ATGTTCCACA TCCGTTTTGA ACAGCCAGCC GCTCAGTTGG
TGATGTCTGT TATAACTCAC CATTTAACGA TAGATAGAGC CTGAGTGGTA GACATCTTCT
TTTTTTGCAT GATTATATCT TTATATCTTT TGCTCTATTT GCATTTGAAG AATATTATTT
GCAAGCGCAT TTAGTTTCTT TATTTACGAA CTAACGACTA ACATAATAAC TACAGGATTT
CTTTCAATCT CAAGTCGGTG GTGTTCTCAC TGTTGCTTTG ACTTACAATG AAAAGGGACA
ATTCAGAGGT ATCGCAACTG TTATTTTCAG AAACAGTAAG AACGCTGCTT TGGCCGTTGA
GAAGTACAAC GGTGCCCCAA TTGACGGTGG CTCCAGCAAG TTGAAGTTGG AATTGATCGT
TGACCCATCC AAGAAGCCAT TGGCTTCCAG AATTGCTGCC AACAAGGTTG AGACTGGCAA
GGCCACCAAG ACCAAGGCTG CCGGTAAGGC TGTGGCAGCT AAGGCAGCTG CTGCCAAGGC
TGCTAGTGGT AAGAAGGCTC CAACGAAGGC TAAGCAACAG CCAAAGAAGA AGCCAGCCAA
GAAGACCAAG AAGTCTGTCG AGGAATTGGA CCAAGAGATG GCTGACTACA TGGACCAGAC
TGCTGCTTAA
 
Protein sequence
MSSLDKSLDD IISSTKRPAR KFARSTKTNK VGKKVGAASK KTIVSFKKAA PAAAAAKVSV 
DLSYATKVVV SGLPKDLKQD NIKDFFQSQV GGVLTVALTY NEKGQFRGIA TVIFRNSKNA
ALAVEKYNGA PIDGGSSKLK LELIVDPSKK PLASRIAANK VETGKATKTK AAGKAAASGK
KAPTKAKQQP KKKPAKKTKK SVEELDQEMA DYMDQTAA