Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_81261 |
Symbol | |
ID | 4851734 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | - |
Start bp | 2687468 |
End bp | 2688977 |
Gene Length | 1510 bp |
Protein Length | 218 aa |
Translation table | |
GC content | 43% |
IMG OID | 640393442 |
Product | predicted protein |
Protein accession | XP_001387082 |
Protein GI | 126275425 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.124697 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATTCACAGAA ATCAACAAAT CCACACCAAA ACACCCACAA ATACTTTAAA AATGTCTTCA TTGGATAAAT CTTTAGATGA CATCATCTCT TCCACGAAGA GACCAGCCAG AAAGTTCGCC AGGTCTACCA AGACCAACAA GGTGGGCAAG AAGGTCGGCG CCGCAAGCAA GAAGACTATT GTCTCATTTA AGAAGGCTGC TCCCGCTGCT GCTGCTGCCA AGGTTAGCGT TGACTTGTCC TACGCTACCA AAGTTGTTGT TTCCGGTTTG CCTAAGGACT TGAAGCAGGA CAACATCAAG GTATGTTGAG TTTGAAAACT CACACGGAGT ATTTTTATAT CGATATTCTG CGAAAAAGAA GAGGGCCAGC TGGGTCTGAC ACGTCACGTT TGATAATTTG ACGTATCACC AGATATAGCT CTGGAAGTCT CTACGAATAG GAGACTGAGT GGGTCTGCGT TATTTATCAT TCTATTTCTC ATTTCTATTT TTGAGGGAGG TTGAGTACAA CAAAAAACGG AACTAGATCG AACAAGAGCA CACGAGAGAG AAGTACAAAA GCTTTGTGCT GGCACAAGCG GATGCTCCAT AGTGATTTAT GGCTTCCAAA CTTGATCTCT TGCTCTATTC ATATGAATTG AATAGTTCGT CTGTTTCACC ATAACAAACT TGAATTTTCT CGTAGGTTCA GTTTTTGCTA TGGTTAATGT TCGGAACGAT CGGTCATTTT CTACAAGTGG ATTTGTTAGA AATTTGTGTT AGCCGCCAAT ATATTTCTTG AAATGACAGA AGTCGATAGA ATCATAGGGA CTGGATGTAT TAGCTTACTA TTCTCCCAAT GATTCGACCT CGCCGATCAC ATGTTCCACA TCCGTTTTGA ACAGCCAGCC GCTCAGTTGG TGATGTCTGT TATAACTCAC CATTTAACGA TAGATAGAGC CTGAGTGGTA GACATCTTCT TTTTTTGCAT GATTATATCT TTATATCTTT TGCTCTATTT GCATTTGAAG AATATTATTT GCAAGCGCAT TTAGTTTCTT TATTTACGAA CTAACGACTA ACATAATAAC TACAGGATTT CTTTCAATCT CAAGTCGGTG GTGTTCTCAC TGTTGCTTTG ACTTACAATG AAAAGGGACA ATTCAGAGGT ATCGCAACTG TTATTTTCAG AAACAGTAAG AACGCTGCTT TGGCCGTTGA GAAGTACAAC GGTGCCCCAA TTGACGGTGG CTCCAGCAAG TTGAAGTTGG AATTGATCGT TGACCCATCC AAGAAGCCAT TGGCTTCCAG AATTGCTGCC AACAAGGTTG AGACTGGCAA GGCCACCAAG ACCAAGGCTG CCGGTAAGGC TGTGGCAGCT AAGGCAGCTG CTGCCAAGGC TGCTAGTGGT AAGAAGGCTC CAACGAAGGC TAAGCAACAG CCAAAGAAGA AGCCAGCCAA GAAGACCAAG AAGTCTGTCG AGGAATTGGA CCAAGAGATG GCTGACTACA TGGACCAGAC TGCTGCTTAA
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Protein sequence | MSSLDKSLDD IISSTKRPAR KFARSTKTNK VGKKVGAASK KTIVSFKKAA PAAAAAKVSV DLSYATKVVV SGLPKDLKQD NIKDFFQSQV GGVLTVALTY NEKGQFRGIA TVIFRNSKNA ALAVEKYNGA PIDGGSSKLK LELIVDPSKK PLASRIAANK VETGKATKTK AAGKAAASGK KAPTKAKQQP KKKPAKKTKK SVEELDQEMA DYMDQTAA
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