| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_81177 |
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| Symbol | PDX1 |
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| ID | 4851935 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 3234405 |
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| End bp | 3235856 |
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| Gene Length | 1452 bp |
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| Protein Length | 418 aa |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | 640393643 |
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| Product | pyruvate dehydrogenase complex protein X |
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| Protein accession | XP_001387188 |
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| Protein GI | 126276068 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.449171 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.375403 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTTCTG TGAATTGTGA CCAACCAGAC AAGTTCAGAT ACTTTGACAG TAATAAAGCG
TTGGGTTTTG CGACATTTCT GCGTCTATTC AACGAATTTT GTTAGTTTCC TTGACGTTTT
CCAATTTTTC ACATTTCTTC AAATTCACAA CTCGCCATTT CCACGATGTT GAGAGCCGTT
TACGCAGCTA GAAAGACCGG CGGATCGAAG ATACTTGTCG CCGCTAGAGG CTTGCATCAT
TCTGCTCCTA CAATGGCGGC ACAGGTATTT ACCATGCCTG CCATGTCTCC CACGATGAGC
GAAGGAGGAA TTGTCAGCTG GAAGTTCAAG CCTGGTGAAG CATTCAATTC TGGCGATGTT
CTCTTGGAAG TTGAAACCGA CAAGGCTACC ATTGATGTAG AAGCTGTAGA CGATGGTAAA
ATGTGGGAGA TTATTGTAAA TGACGGTGCC AAGGGTGTAG CTGTAGGTGA ACCTATTGCT
TTGCTTGCTG AACCTGAAGA TGACTTGCTG ACTTTGGAAA GACCAGTTTT AGAAACCAAG
GCTACAAAGC CTGCAGAAAC AGCAGAAGCA CCAAAGGCAG TCAAAACTGA AGAACCTGTA
GCTTCCAAAA CTCCTGCTGC TCCTAAAACT TCTGGCTCTA CTGAGATTTT TGCCCAGGCA
AATGTATCAC AGAAGTTATC ACCAGCGGTC GAATTGTTAT TGCACGAAAA CGACATTTCC
GTTGAAGATG CTTTGGGTTC TATTCCAGCC TCGGGTCCGA AGGGTAGATT GTTGAAGGGT
GACGTTTTGG CCCATTTGGG TTCCATCAGT AAAGACTCTA TTATCAAAGT TACTGAATTT
ATCAAGTCTA GGGAACACTT GGATTTGTCC AATATTGTGA AGGCTGACCC TGCTGAGCTC
AAGAAGAAGG CCGAAGCTGC TGCTCCTAAG CCTGAAGCAA AAGCCCCTGC TCCAGAACCA
GTTAAGCCTA AGAATGTCTT GACCGTAGAA TTGACTTCAG CTTTGGATGG AGATATCTCC
AAGGAAAAGT TTAAATATGC ATTTGAAAGA TCAATCGAGG TCGCCATTAG ACAGACGTAC
GGCCGCAAGT TCCCACAGTA TGCTACATCG CCTGTGGGCT CTTCGTTGAC AGCCGCCGAT
GATCTCTTCG ACGATTTGCT CACACCTTCT GTAACAAAGT CCAGATTTGA AGTCTACGGC
ATCAACTACA AATTCTTTGG TCCAAGCTTA GCAGCCCCAT CGAAAGCACA GAGCATTGCC
AGCGATTTTG ATGAGCTTTT GGGCTTGACG TCGTCATCTC CAGCTTATGT AGAAGAAGGC
AGTGCTAAGG TCAATGTCGA ATTCAAGATC AAGTTTGACG AAAAGTTGAG CGACTCAAAG
GATTTTGTGT CCGTGTTCGA GGACTCACTT CTCTCACAAA TCCCAGCCAA TAAGTTGAAG
ATCTCCAACT GA
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| Protein sequence | MLRAVYAARK TGGSKILVAA RGLHHSAPTM AAQVFTMPAM SPTMSEGGIV SWKFKPGEAF
NSGDVLLEVE TDKATIDVEA VDDGKMWEII VNDGAKGVAV GEPIALLAEP EDDLLTLERP
VLETKATKPA ETAEAPKAVK TEEPVASKTP AAPKTSGSTE IFAQANVSQK LSPAVELLLH
ENDISVEDAL GSIPASGPKG RLLKGDVLAH LGSISKDSII KVTEFIKSRE HLDLSNIKAE
AAAPKPEAKA PAPEPVKPKN VLTVELTSAL DGDISKEKFK YAFERSIEVA IRQTYGRKFP
QYATSPVGSS LTAADDLFDD LLTPSVTKSR FEVYGINYKF FGPSLAAPSK AQSIASDFDE
LLGLTSSSPA YVEEGSAKVN VEFKIKFDEK LSDSKDFVSV FEDSLLSQIP ANKLKISN
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