| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_81056 |
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| Symbol | SIP2 |
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| ID | 4851915 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 3171846 |
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| End bp | 3173982 |
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| Gene Length | 2137 bp |
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| Protein Length | 623 aa |
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| Translation table | |
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| GC content | 43% |
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| IMG OID | 640393623 |
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| Product | Sip1p-Gal83p family protein |
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| Protein accession | XP_001386934 |
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| Protein GI | 126276009 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.896245 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAACA ACACTTCAGT ATCAGCGAAT ACTTCCACGC GGAAGTCTGC TGCCGCCATT
CTCCACCAAC AGAATCTCGA TCTGGAGTCA CAAGTGTCGG TAGCCGGTTC ACGAAAGTCG
TCTTCAGGAA GAAATGCTAC AGCTAAAGGA GACACTTCGC TAGATGAAGA TTTCAGTGAT
TTGATTCTCC ACCAAGTAAA ACGCCAGGAT CTGACGAGCT CGTCGGGATA CCTTCCCACG
ACTAATATCC TGGCCGGTGG GATCATTCCC GTCTCCTCTA ACATCGGAAG CACGCCTGCT
GTAACGAATA CTAATGCTAA CGCTAACCTT GCTCATAACA CTAATGCTGA TCCATATTAT
TCAGCTACGT ATAATCAATT TTCAAATGAC CTTATCGAAG ACGAGTTCAA TGAGTTGAAT
GATGGATTAT TGGATCAGGA ACCAGAAGTC TCTCGTAATA TCTTGCCCGA TGATGCTAGT
GAAATCACTA CGGAATCTAC AAACAGCGGA GCAAACGACG AAACTCAAGA CAATATGGAT
GTGGATGAGG ACCATTTCAA AGCTGTAACA GACCAATCCA ATACTGATTC TGACTTGGAC
ATGAATCATG CATCTGGCTT GTCGAAAGTA GACTTCACCA AAGTGACACC AGCCAACCAG
CAGCCTCATG AAGTTTCTGT AAAAGTAGAT AACTCATATG TTCACCAGAG TAGAAAACGA
CACAATCGTT CGGGGAATGC TAGTGCCAGC AACGTCACCA GCAACCTCAT TCCAGTGGAA
ATTAAATGGG TGAACTCGTC TCGAGAGGTC ATAAACAAGA TCTCTATCAT TGGCTCGTTC
ACCAACTGGA GGGACAGCAT TCCTTTGTCG CTTTCACCTT TTCATTCGAA CGAATACGTG
ACCACCTTAA ACTTACCTCT TGGTGTCCAC AAGTTGTTGT ATATCATCAA TAACGAATAC
CGAGTCAGTG ACCAGTTGCC TACTGCAACA GATCTGGAGG GAATTTTCTT CAACTGGTTC
GAAGTCATAG ACGAAGCCCA TCTCTTCAAT CATTCATTAA ATCAACCAAA TCATATCGGT
GCTTCTACAG ACTACGATGC CAACATAATC TCTCCGCCAT ACTACGACTA CAAGACAACG
TCGTCTTTCT CAGTAAACCA CCAGGTACAG CCTCAAACTG CTGGCAAGTT TGAAGTGGAC
CAAATCAACA GAAAATCTAA CAGCTTCTTG GCCAAGATCT CAAAAGAGAA CTCGTCCAAC
TTCGAACATG TAGAATACGC GGAAGACAAA AACGACGACA TGAAGGACAT ACGGATGCAC
GAAGAAGAAC AAAAGAGTTC CGAGAACTAT CCATATGGAA GTAACAAAGG CTCAGTGCCA
GGCTCAACTC AATATGTGCC ATATAGCATG TCGTCTTCTA CATCTTTGCG AACGCCCACA
ACTGAGAATG TACCAAAATT AGAATATTCC AGTGACATTC CAGAAATGTT TCAAAACTAT
GACTACTTCA AGAATAAGAG TCCAAACTAC GAACTTCCTG AACCACCACA GCTCCCAGCA
CACTTAAACA ACGTGTTATT AAACAAAATG TCGCAGACAT CGTCTCAAAG CTCCCAGAGC
CACATTAGCA ATTCACAGAC AGCTCACAGC TCTTCTTACG GTTCCACGCA TCATCAGAGC
CTCAAACCTC CCAATGCTGC ATTTGTTTCA GAATCTAGCC CAACTAACCA GTCTCATAAC
AAAAGACCCA CCTTAAGAAG AGCCGACAGC TCATACTACG CTTCAAACAA AGAATCCTAC
CACCAGTCAA TTCCCAACCA CGTGATCTTG AACCATTTGA TGACGACCTC CATTAGAAAC
GACGTCTTAA CAGTTGCTTG TATAACAAGG TACTCCGGTA AGTTCGTTAC CCAAATCATG
CATTCTCCAG CAGATAAATG AGATGAATGT TATGAATGCA AATGCTGCGA ATGCTAAGGG
AAAGTAGAAT AGTGGAATTA CTGGCTAGTG TTTTTGTATG TATGCTTATT ATTGCTTTAT
TTAACTTGTA TTTTTCTCTC GTTCTCGTTG ACTAGCTTAC GCGGTTAATT CATTCAATTC
ATAAATAAAA CATGAAATAA ATAACAATAC AAACTAG
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| Protein sequence | MGNNTSVSAN TSTRKSAAAI LHQQNLDLES QVSVAGSRKS SSGRNATAKG DTSLDEDFSD
LILHQVKRQD LTSSTPAVTN TNANANLAHN TNADPYYSAT YNQFSNDLIE DEFNELNDGL
LDQEPEVSRN ILPDDASEIT TESTNSGAND ETQDNMDVDE DHFKAVTDQS NTDSDLDMNH
ASGLSKVDFT KVTPANQQPH EVSVKVDNSY VHQSRKRHNR SGNASASNVT SNLIPVEIKW
VNSSREVINK ISIIGSFTNW RDSIPLSLSP FHSNEYVTTL NLPLGVHKLL YIINNEYRVS
DQLPTATDLE GIFFNWFEVI DEAHLFNHSL NQPNHIGAST DYDANIISPP YYDYKTTSSF
SVNHQVQPQT AGKFEVDQIN RKSNSFLAKI SKENSSNFEH VEYAEDKNDD MKDIRMHEEE
QKSSENYPYG SNKGSVPGST QYVPYSMSSS TSLRTPTTEN VPKLEYSSDI PEMFQNYDYF
KNKSPNYELP EPPQLPAHLN NVLLNKMSQT SSQSSQSHIS NSQTAHSSSY GSTHHQSLKP
PNAAFVSESS PTNQSHNKRP TLRRADSSYY ASNKESYHQS IPNHVILNHL MTTSIRNDVL
TVACITRYSG KFVTQIMHSP ADK
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