Gene PICST_80821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_80821 
SymbolACP2 
ID4851112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp961168 
End bp961908 
Gene Length741 bp 
Protein Length128 aa 
Translation table 
GC content38% 
IMG OID640392820 
Productmitochondrial acyl carrier protein 
Protein accessionXP_001387820 
Protein GI126274098 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0236] Acyl carrier protein 
TIGRFAM ID[TIGR00517] acyl carrier protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.454049 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.13999 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CTGCCATTTC CACATTACTG CCATGTTTAG AACATCCTTG TTGAGAAACT TGAGAGCTCC 
TTTAATTTCG AGCTCTGTCA CCAGAAAGCC ACTTGTCCAA AATGTCGTAG CTTTGAGCCA
ACCACTTTTT GTGAGAAACT ATTCTGGCTT CCCACCTTTG ACCAGAGAGT TGGCCAAGGA
AAGAATATTG GAATTGTTGG AAGGCTACGA CAAGGTCGAT GCCTCCAAGG AAATCACCGA
AGAATCGTCT TATGTACAAG ATTTGGGTTT GGATTCACTT GATGTTGTTG AAGTTGTCAT
GGAACTCGAA CATGAATTCA ACATCCAAAT CCCAGATAAC GAGGCTGACA GCTTGAAAAC
CGTTGGTCAG ACTATCGACT ATGTTCTCTC ACAAGAAGAC TCTGTCTAGT CGAGAAACCG
GGTCTTTTTT GACGATTTTT CACTGCATAT TCCATTTCCT TTGAACAGAA ATGACTGAAA
TGGTAAGATA GATTATAAAA ATGACAAAAA TCATTGACAA CACGTCTTCA TCAGCAAACC
AGCAATGGGT ACAGCAATCA TTGAATATTT GACCCTATTA TACCTGTCTT GTCTGTATTT
TTACTATTTC CTTCTACTGT TCTTCATCTT CATACACCAA TACACGATAG CTATTTAACT
GTAAAGTTGC AGATTAGAAT ACCATTATCA CTTAACAAAT GAATTTCAAT CTTTAGTAAT
ATCAATATAT ACACCGTTGC T
 
Protein sequence
MFRTSLLRNL RAPLISSSVT RKPLVQNVVA LSQPLFVRNY SGFPPLTREL AKERILELLE 
GYDKVDASKE ITEESSYVQD LGLDSLDVVE VVMELEHEFN IQIPDNEADS LKTVGQTIDY
VLSQEDSV