| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_80516 |
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| Symbol | SEC23 |
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| ID | 4850951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 535124 |
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| End bp | 537458 |
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| Gene Length | 2335 bp |
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| Protein Length | 749 aa |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | 640392659 |
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| Product | component of COPII coat of ER- Golgi vesicles |
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| Protein accession | XP_001387742 |
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| Protein GI | 126273912 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5047] Vesicle coat complex COPII, subunit SEC23 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.461247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CGCACCAAAA TGAACTTCGA AGAGGCCGAG GACATCAATG GTATCCGTTT TGCGTGGAAT
GCCCTTCCAT CCACCAAAGT GGAAGCTGGT AAAGTTGTAG TTCCCACTGG GGTGATTTAT
ACTCCATTGA AGCAGAGAGA AGATTTGCCT GTGGCCGTGT ACGATCCCAT TTTCTGCTCC
AACCAGAACT GTAAAAGCAT CTTGAACCCT TACTGTACAA TCGATCCCAG TGGCTTCTGG
CGTTGTCCTT TGTGTTCATA CCGAAACCCA TTGCCAGCTC ATTACCAGGG TGTTACTCCG
GAGAACTTAC CTCTTGAGCT TCAGCCAGGC TCTTCTACCA TCGAGTATAT CACGGCCAGA
CCTGTCCAGA ACCCACCCAT TTTCTTCTTG TTGATCGATT TGTGCCAGGA TGAAGATAAC
TTGGCTGCGT TGAAAGAAAC TTTGATCGTT TCATTGAGCT TGTTACCACC CAATGCCTTG
ATCGGTTTGA TCACATACGG CACCATGGTT CAGGTGCACG ACTTGGGCTC AGAGAAAATC
AGTAAGTCCT ATATCTTCCG CGGCGACAAG GAGTATACGG AGAAGCAGAT CAGCGACATG
TTGAACAGGC CAACATCGAC CCCTCAGGGC CAGTTGCCTC AGTTTGCTAA TTCGTTAACA
AGATTCTTTT TGCCTGTAGA AGACGTAGAG TTCCAGTTGA CCTCCATTTT AGAGAACTTA
GGTAAGGACC CCTGGACCGT GGCCAACGGC GACAGACCTC TCAGATCGAC CGGTTCGGCT
TTGAATGTTG CTGCTAACTT GTTGGGCTCC ACGTTCCCTG GCTTTGGTGC CAGAATCATG
TTGTTTTCCG CGGGACCGGG CACCTTGAGC CCGGGCTTGA TAGTTGGCCC CCAATTGAAG
GAGCCTATCA GATCCCACTC CGACATCGAC AAGGACAACG CTAAGCACTT CAAGAAGGCG
GTCAAGTTCT ACGACTCCAT TGCTGCCAAG ATGGTCAAAA ACGCACATAC CGTCGACATT
TTTGCCGGCT GCTACGACCA GATCGGAATG TTGGAAATGA AGAACTTGTG TAACTTAACC
GGCGGTACAT TGTTGTTGTC TGATGCATTC ACCACATCCA TCTTCAAGCA GTCGTTTTTG
AGATTGTTCA ACAAGGATCA CGAAGGCTAC TTGTTGATGG GCTTCAATGG TACTTTCGAC
GTGAAAACTT CGAAGGAGTT GAAGATCAGT GGACTTATTG GCCACGCTTC GTCCATGAAC
GTCAAGACAC AGAACGTTTC TGAAAACGAA CTTGGTATCG GTGGAACCTC GCAGTACAGA
TTGTGTTCTG TTTCTCCTCA ACACAGTTAT GCTGTGTTCT TTGATGTGGT CAATACTCAA
CTGTTGCCTC AAAACGCACA GAGCTACACT CAATTCATCA CCCACTACCA ACATGCATCT
GGTACCTACA GAATTAGAGT CACGACCGTT TCCAACTTTT TAACCAGTGA TGAGCAAACC
TTGACTAACT CTTTCGATCA GGAGGCCGCT GCTGTCTTGA TGTCTAGAGT CACATTGTTC
AAGTCTGAGC AAGATGACGG CGCAGATGTT TTGAGATGGA TCGACCGTAT GTTGATCAGA
TTGTGTCAAA AGTTTGCGGA CTATAGAAAA GATCAAGAGG AATCGTTCAG ACTCGGACCA
CAATTCCAAT TATATCCACA ATTCATCTAT TATTTACGAA GATCTCAGTT CTTGCAGGTC
TTCAACAACT CTCCTGATGA AACAGCATTC TATAGACACG TATTATTAAC TGAAGACACT
AACAACTCGT TGATCATGAT CCAGCCTACG TTGACTTCCT TCTCATTGGA TTCAGAACCA
GAAGCTGTGT TGTTGGATTC TGTCTCCATT AAAGACGACA AGATCTTGTT GTTGGATACT
TTCTTCCACA TCTTGATTTT CCATGGTAAA ACTATTGCTC AATGGAGAAA AGCCGGCTAC
CAAAACCAAC CGGAGTACGA AAACTTCAAG TTATTACTTG AGGAGCCAAA GCAAGAGGCC
GCCGAATTGT TGGTTGATCG TTACCCATTG CCTAGATTTA TCGACACTGA AGAGGGTGGT
TCGCAAGCTA GATTCTTGTA CTCCAAGTTA AATCCTTCTA TTACATACAA CAGCTCTGAA
TTTGCAACTA ACAACGGAGC CATTGTGTTG ACCGATGATG TCTCTTTACA AGTTTTCATG
GGTCACTTGC AGAAGTTGGT TGTGTCGGGC TCCAGCTAGA CCTTGAATGC TCTAACATAT
TTACTGTATT GAATATATAT ATACAAAAGT TTTTATAATA TCATGTGTAA TGAGG
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| Protein sequence | MNFEEAEDIN GIRFAWNALP STKVEAGKVV VPTGVIYTPL KQREDLPVAV YDPIFCSNQN
CKSILNPYCT IDPSGFWRCP LCSYRNPLPA HYQGVTPENL PLELQPGSST IEYITARPVQ
NPPIFFLLID LCQDEDNLAA LKETLIVSLS LLPPNALIGL ITYGTMVQVH DLGSEKISKS
YIFRGDKEYT EKQISDMLNR PTSTPQGQLP QFANSLTRFF LPVEDVEFQL TSILENLGKD
PWTVANGDRP LRSTGSALNV AANLLGSTFP GFGARIMLFS AGPGTLSPGL IVGPQLKEPI
RSHSDIDKDN AKHFKKAVKF YDSIAAKMVK NAHTVDIFAG CYDQIGMLEM KNLCNLTGGT
LLLSDAFTTS IFKQSFLRLF NKDHEGYLLM GFNGTFDVKT SKELKISGLI GHASSMNVKT
QNVSENELGI GGTSQYRLCS VSPQHSYAVF FDVVNTQLLP QNAQSYTQFI THYQHASGTY
RIRVTTVSNF LTSDEQTLTN SFDQEAAAVL MSRVTLFKSE QDDGADVLRW IDRMLIRLCQ
KFADYRKDQE ESFRLGPQFQ LYPQFIYYLR RSQFLQVFNN SPDETAFYRH VLLTEDTNNS
LIMIQPTLTS FSLDSEPEAV LLDSVSIKDD KILLLDTFFH ILIFHGKTIA QWRKAGYQNQ
PEYENFKLLL EEPKQEAAEL LVDRYPLPRF IDTEEGGSQA RFLYSKLNPS ITYNSSEFAT
NNGAIVLTDD VSLQVFMGHL QKLVVSGSS
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