| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_80235 |
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| Symbol | SSE1 |
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| ID | 4851119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 975430 |
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| End bp | 977685 |
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| Gene Length | 2256 bp |
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| Protein Length | 696 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | 640392827 |
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| Product | heat shock protein of HSP70 family |
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| Protein accession | XP_001387826 |
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| Protein GI | 126274105 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0443] Molecular chaperone |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.153292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.529839 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CCCGATATCA TCCCATTTCT GAAAATTTTC AGTGATTGAG TTTTCAGTTT TTACCACCAC
CACTTCTATA CCACTACCAA TACAATGTCC GCTCCGTTCG GTGTCGATTT AGGAAACAGC
AGCTCTGTCA TTGCCTGCGC CAGAAACAGA GGAATTGACA TCATTGTCAA CGAGGTTTCC
AACAGAAACA CTCCCTCGCT TGTAGGATTT GGCCCTAAGA ACAGATTCAT CGGCGAGTCC
GGTAAGAACC AGCAGACTTC GAACTTGAAG AACACCGTCG ACAACATCAA GCGTATCCTC
GGTGCCAACT TCAATGACCC AGATTTTGAA ATTGAGAAGA AGTACTTCAC ATGTCCACTT
GTTGAATCAA AGGATGGAGG CATCTCTGCT AAGGTCAGAT TCTTGGGCGA GCAGCAGGAA
TTCACTGCTA CCCAGTTAGC AGCCATGTAT ATCGATAAAA TCAAGGATAT CACAATCAAA
GAGACCAAGG CAAACATCAC TGATATTTCT TTGTCTGTTC CAGTATGGTA CACCGAGAAA
CAGCGTCGCG CCGCCGCCGA TGCTTGTAGA ATCGCTGGCT TGAACCCTGT CAGAATCGTC
AACGAAGTCA CAGCTGCTGC TGTTGGCTAC GGTGTCTTCA AGGCTAACGA CTTGCCAGAA
GATGAACCTA AGAAGGTGGC GTTTGTGGAC ATTGGTCACT CCTCGTACCA AGTCTCTATT
GCTGCTGTCA AGAAGGGTGA ATTGAAGATT CTTGCTTCTG CTTACGACAA GCACTTTGGT
GGTAGAGATT TCGACTACGC CATCGCCAGC CACTTTGCCG ACGAATTTGT TGGCAAGTAC
AAGATCGACG TCAGAGAAAA CCCTAAGGCT TTCTACCGTA TTTTGACTGC TGCTGAGAAG
TTGAAGAAGG TTCTCTCTGC TAACACTCAG GCTCCATTCA ATATCGAGTC CGTGATGAAC
GACGTTGACG TTTCTTCGTC TTTGACTCGT GAAGAGTTGG AAGAGTTCGT ACAGCCTCTT
TTAGCCAGAG TTCATGTTCC AATCGAGTCA GCTCTTAAGG AAGCTGGTTT GACTACTGAC
GACATCGACT CCATCGAAGT CATTGGTGGC TGTACCAGAG TTCCTTCTTT GAAGAACAAG
TTGAAGGACA TCTTTGGCAA AGAGTTGTCT TTCACTTTGA ACCAAGATGA AGCCATTGCC
AGAGGTAACG CTTTCATCTG TGCTACCCAC TCTCCAACCG TTAGAGTGAG ACCTTTCAAG
TTCGAAGACT ACAACCCATA CTCAGTCTCT TACTTCTGGG CCAAGGAAGA AGAAGACGAA
GACCACATGG AAGTTTTCCC AAGAGGTGGC TCGTTCCCTT CGACCAAGAT CATCACCTTG
TTCAGAAAGG GTGACTTCGA AGTCGAAGCC AAGTACACCA AGCCTGAAGA GTTGCCAGTT
GGCACTTCTC CACTCGTAGC CAAGTGGGAA ATCAAGGGTG TTGTTCCATC TGAAGGTGAG
ACTTCTATTG CCACCAAGAT CAAGTTGAGA AACGATCCTT CTGGATTCTA CACTATCGAG
GCTGCTTACA CCGTCGAAGA AAAGATCGTC AAGGAATTAG TGGAAAAGGA ACCAAAGGAA
GGTGAAGAAC AAGACGACGA AGATTCTGAA CCAGAATACC GTGAAGTTAA GAAGTTGGTC
AAGAAGGCTG ACTTGGAAGT TATTACTCAC TCTGCTTCTC TTGAACCAAG CGTCAGAGAA
GAGTTTATTG AAAAGGAAAA CGCTTTAGTC ATGGGTGACA AGTTGGTTGC TGATACTGAA
GACAGAAAGA ACGCTTTGGA AGAGTACATC TACGACTTGA GAGGTAAGTT GGACGACAAG
TACAAGGACT TCGCCTCCGA TGCCGAAAAG GAACAATTGA CTGCCTTGTT GAGCAAGACT
GAAGACTGGT TGTACGATGA AGGTTACGAT TCGACCAAGG CTAAGTACAT TGCTAAATAC
GAAGAGTTGG CTTCCAAGGG AAACCTCATC AAGGGCCGTT ACTTGCAAAA GGAAGAAGAA
AAGAAGCAAG CCTACAGACA GAAGCAAGAA GCTGCTCAAG CTGCTGCCAT GGCTGAGAAG
TTGGCTGCTG CCAGAGATGC TTCAAAGGCT GAACAGAAGC CAGCTCCTGA AGAAGCCGAT
GTTGACATGG ATTAGATTAG AGAGGTGCTC TTAAATATAT AGTTCTTAAT AATTTCCGGT
TACATATACA TAATTGAAGG AGTATTGTTG ATTGAG
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| Protein sequence | MSAPFGVDLG NSSSVIACAR NRGIDIIVNE VSNRNTPSLV GFGPKNRFIG ESGKNQQTSN
LKNTVDNIKR ILGANFNDPD FEIEKKYFTC PLVESKDGGI SAKVRFLGEQ QEFTATQLAA
MYIDKIKDIT IKETKANITD ISLSVPVWYT EKQRRAAADA CRIAGLNPVR IVNEVTAAAV
GYGVFKANDL PEDEPKKVAF VDIGHSSYQV SIAAVKKGEL KILASAYDKH FGGRDFDYAI
ASHFADEFVG KYKIDVRENP KAFYRILTAA EKLKKVLSAN TQAPFNIESV MNDVDVSSSL
TREELEEFVQ PLLARVHVPI ESALKEAGLT TDDIDSIEVI GGCTRVPSLK NKLKDIFGKE
LSFTLNQDEA IARGNAFICA THSPTVRVRP FKFEDYNPYS VSYFWAKEEE DEDHMEVFPR
GGSFPSTKII TLFRKGDFEV EAKYTKPEEL PVGTSPLVAK WEIKGVVPSE GETSIATKIK
LRNDPSGFYT IEAAYTVEEK IVKELVEKEP KEGEEQDDED SEPEYREVKK LVKKADLEVI
THSASLEPSV REEFIEKENA LVMGDKLVAD TEDRKNALEE YIYDLRGKLD DKYKDFASDA
EKEQLTALLS KTEDWLYDEG YDSTKAKYIA KYEELASKGN LIKGRYLQKE EEKKQAYRQK
QEAAQAAAMA EKLAAARDAS KAEQKPAPEE ADVDMD
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