| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_78610 |
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| Symbol | |
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| ID | 4840111 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | + |
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| Start bp | 163621 |
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| End bp | 168146 |
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| Gene Length | 4526 bp |
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| Protein Length | 1298 aa |
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| Translation table | 12 |
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| GC content | 39% |
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| IMG OID | 640391426 |
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| Product | predicted protein |
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| Protein accession | XP_001385364 |
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| Protein GI | 150865944 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATTTCATTGC TGAACATTTT CAACATATAT AACATTTACT TTATCACATA AACTCATTCC
AGCTTCCATA TAGTCCCTTC ATTTCTGTCA GCAAAGTCAT TTTTCATCTT CATCTAAAAT
GCTGCTGCAC CACAAGGTCT ATGCAAATGA GCTTTTCCAG ATTATGGCAT CGAGGGACGT
CGACCAGACA AGAAAGCTCG AATTAGTATT AAAGCTAAAG ACGAATATAA AAAAGGATGC
GGTTGATATT GCTCAAGTTC CAACTTATTT TGAAGCGTTA TCTATAGGTG TAGACATTCC
CGATTTGGGT ATTCTGGTAG CCAGCTTTAG CACCCTTGCT CATTTGATCA AGAGAGTAAG
TATGCAAGAC AAAACAGGAA TGGTGCTTAA AAACCAAAGC TTTCTTGTTT TACCCATCAT
AATCAACCGA TTGGCCAATT CAAACACGTC TACGTTGAGT TCAGCAAGAA AAGCATTGGA
GGCATATTGG TTCTCATCAC CTCGCGAAGT TGAAAGTGCC ATTTTAGACA TAGCCTTGAA
GCACAGAAAC ACCGACATAA CTCTTGAAGC TGTCCATTGG CTCCACCACA TCATAAGCAA
TGTCAACCAG CATTTCAATC TCACAAGGTT TGTTCCACAG TTAGCTAAAC TATTGGCCAC
GTACCCATCG TCGCATTCTA CACAACTACA GAATTCTATT AAGTCATTGC TCTGTGACTA
CTATAATTTT AAACAGAACA GATTATACAA ATTCGACTTG GCTCGCGAAC TTGAACTTAA
GAATGTTCCT GATACCATCA AAGAATCCAT AATGCAAAAC ATCGCAGGGA TTAACCCAGA
ATCTACTTCT GTAACCAAGC CCGATTCCAA TTTCGTAATA GCTGGTGATG GCAACGTCCG
CGTAACGGCC ACAATAGAAT CGACTGAAAA AAGGTATGCT CCAGTCAGAC CCAGATATAC
TGCTTCTACA GTGAGCTCTC GTTCTGAATT AGTTCCGACA GCGAAAGCTT CTTCTCCATT
ACCAGTACCA GTACCAGCTC AAACGAAAAT GACGCCGCCT CCAGTTCAAG ACCATCAAAG
CATACCGTCT GAAGCAGAAA CTTTACTTCC AGAAATTCGC GACATCATTT CTAAGTACAA
CTATGAATTA GATACTTCAA TTAGATCTGT CAGCTTTGAG GGATCAGAAC AAATGCTTTC
CACATTCAAC GACCTTCTTC CTCCATTCAA CAGCAAGGAA ACAGAATTTA ACTGGGGCCA
GCGTGAGAAG AATATCGTTC AAATGAGATC TATTTTGCGA GGCAATGCTC CATCCCTTTA
TAGGAGGGAT CTTATAGTCG GCTTAAAAGA TTCCGCCGAA GCAATCTGTA AGGCAGTTTC
TTCTTTACGA ACTACATTGT CTTCTCATGG TTGTCAATTA GTAAAAGAAT GCGCCATATT
CTTAAAGACT GATATTGACT CTCTTGTTGA TCTTTTCATG CCTTCCTTGG TTAGGCTCTG
TGCTGCAACT AAGCATATAG CTTCTACAAA TGCCAATATG TCCATTGTTG CTATATGTGC
GAATGCTTCC TATAGCCCAA GACTATTGCA AAGAATTGTC AATGCTACTA ACGAGAAAAA
CGTTCAACCA AGGTCGTACA GTGGTATTTG GTTGCAAATC ACTGTGTCCC GTTTCTTTAA
TTCGCATTCC TTTCTTTCTT CTCATGGATC TACTCCAAAT ACAGGGGTCG ATTTGGCGAT
GAAAGCATTA GCAAAATTGC TCAAGGATCC AAATCCAACA GTAAGACAAA TAGCAAAAGA
TTCATACTGG TGTCTTTGGA GAAAGTTGCC AACACAATCA GAATTGTTAT TGAGCAAATT
GGAACCCAAG ATTATCAAAA TTGTGGAAAG ATCAAGACCC AAGGATGTTT CACACGAGGA
AGTTTCGGCC CCTACTCTAA ATATGCAAAG ATCCCGCCCC TCTTTAAAAG AAACTATAAT
TGAAAGGAAC AAGGACCTCA GACTAAAGCA AAGAGAATTG AGTTCTTCTC GAATGTCAAC
CAGAGAAGCG TCTGATTCCC AGAAATTAGA TCAGAGTCAC CGTGAAGAGT TACATATTAA
AAGAGTTGCC ACTAGGACCA ATTCTACAAA TGGATTTAGA CAAAATTCAA TTGAAAGAAA
CTTATCGAAT TCTCACAAGC CAGATTTAAG ACCACCCAGC AAGGAAGGAG TATCTCCAAA
GGATATAGAA CAGGAGAGTG TGCAGCAGGA GACAACACGC ACAAAACAGA CAGACACAGC
ACCAGCTTCT AAAGAAGTAG CCTTCGATGT ACAAGCAGAT CCTATCCTTA AATTCTTATC
TTCATATCAA ACAGATTTAA TAAAGGAAGG AATCAATTTA CTTAAATATG CCATCATGGG
CGAAGAAGAA CTATCTCCTG AGATAACCTC ATTATTGAAG AGTATCTCTC TCAGACAACC
GAAGCTTTTA GAACCTCTTC TTTTATCCAA TGACAACTTG TTCAAAAGAA GTTTTCAGTT
CTTTTCTGCT GAAGACTTCC TTCGTATTTG CTCAATAGTT ATTAATCCAA TCGAAGGAAG
AACTATAGAG CTTTTAATCT CTATGATGAC AGTCGATGAG CTCTACGAGT CGATAATCAA
ATTGTTGTCG TACTCAATCA ACACAGCTAA TATATTAGGA GATGATGAAC TTACAATGCA
AGTAATCAAA TACAAATCTA GCATCATTCA ATTGATTGTG GTTTTCCTTC AGAGCAGCCT
TGAAAAGATA CCGATTCGAG ACAGTTATTT TCTGAAAGTC ACTTCAAACT TTTTGGAGTT
GGTAAGCATT TTGAAATCAA CTGATATTTA CCCTGAGTTC TCGAAATTAC TAGCTAAGCT
TTATTCAATC AATATAGCGC TATTCGTATC CGAATTGGAT CTTGTTGACA TCAATACAAA
AGAAGAAGTT GAATATATTG TTGGAATCGA CCATACACTA AGTATGAAGA ATATTCCCAA
TACAATGCCT AATTCTTTAT TTGAGTTGAC CGAAGTTCAA AAGACCCATA GCTATGACGG
CTTCTCGCCA GTCAAAACAA ATCAAGATTT TACTATGATA TGGCCAGAAA GGAAAGACAA
CGATGATTAC AATTTCATTC CCAAAAGTGC AAATGATTCT CAGAAGAATA TTGCAGCTCA
ATTTCAAGGA TTCAACCATC ATGAAAGTAA ATCTGAAGAT CCTGTGAAAG AATATAGTGA
TAGTATGGAT ATTGACAATC CCGCTGCCAA CGACAGAAAT TCGACACCAG CTCTTGCCGG
AGAGCTCTCC GAATCCAATT CTTTGCATGC TGCCATTGAA GGAGTAGCTG ATTTATCCAT
GGATCAACAC GATAGTCCCA AAAACAGGGC CACTGACGAA AATGTGTTTC TTGATTCGTC
CAGTAGTATC AAATCTGGAT TGTTCAACAG AACTAATGGA GATCACTCAA TTGAATTGGC
TAAAGATTTA GCTCAGGTTC AAATATGCGA GCAGCCGCCC TCTCTCATTG ACCAGAATGT
CCAACTCCAG ACTTTTCTTG ATAAGGTTGA TCCGTTGAAG AGCATCTCCA ACAGAAATAA
ACCCATTGCA ATTTATGAAG ATTCGAAGGG TTCTCCTCAG AAACTAAAGG AACACAGATA
TTCAGAATTC AATTGGTTTA ACTTTCAGGT TGCAAGATTG CAACTCGAAT CAGACGATGA
CGAGGTCGAA GACAATGAAA CTACTGAAGA CGATTACAGT GAGTTATTGA TGGATGTATG
CGAGAGTTTG AAGTCGTTAG AATTAGATTC TAAGACCTTA ACAACTGCAC TTGATTTACT
TCAGAATATG CATAGGTTTG GATTCGAGTT TGTTAAGTAC TATGAAAATG AAGGAGCCAA
ATTAATGGAG GAATCTCTCT GGCAATTTTT CCATGATTGC AACAAAGTTT CCATTACCAA
CAAAGTCAGA GGATTAGTAT TATTGAAGCA ATTATTAATC ATCCATTCGA AACTAGACTT
GGCCAACTTA TGGACAACAT TGATCAATGT TGCATGCCTT CCAGATTCTG AAAACGAGAT
CGCGTTTGCT CTACGTGATA TTTCCTCCGA AATTCTTTCT GGTCTTTACC GGAGTGATGA
ATTGCTTGAT GTTTTATTCA GTTCATTTAC AAGCGACCAC TTATCGAGAG CACTGACATT
CATTTTGGGG ACACTTTCAA AAGTCTTGGA TTCCACATCA ATCCCAGAAT TGTTAAGTGA
TTCAATTCTT CAACAGATTG ATCGAGTTCT TAGGAACTTT GTTAATAGCA GAAATGCCGA
GTGTCGAAGA TATGCTATTC TTTGTTACGG GAAGCTTGTC AAATCCTCCA GAGTTAGTTT
TGCGGGAAAA TCTCCCGACA ACACAATTCT AGACGGAATC ATTCAGAGAT TTTCCCCAAG
CCAGAGAAGA TTGGTGGAAT ACTATAGTCA AGACCCAAAG AGCTAGAATT TTACACTGAA
ATAATAAGCA GAGAATTTAT TAACAT
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| Protein sequence | MSSHHKVYAN ELFQIMASRD VDQTRKLELV LKLKTNIKKD AVDIAQVPTY FEALSIGVDI
PDLGISVASF STLAHLIKRV SMQDKTGMVL KNQSFLVLPI IINRLANSNT STLSSARKAL
EAYWFSSPRE VESAILDIAL KHRNTDITLE AVHWLHHIIS NVNQHFNLTR FVPQLAKLLA
TYPSSHSTQL QNSIKSLLCD YYNFKQNRLY KFDLARELEL KNVPDTIKES IMQNIAGINP
ESTSVTKPDS NFVIAVQDHQ SIPSEAETLL PEIRDIISKY NYELDTSIRS VSFEGSEQML
STFNDLLPPF NSKETEFNWG QREKNIVQMR SILRGNAPSL YRRDLIVGLK DSAEAICKAV
SSLRTTLSSH GCQLVKECAI FLKTDIDSLV DLFMPSLVRL CAATKHIAST NANMSIVAIC
ANASYSPRLL QRIVNATNEK NVQPRSYSGI WLQITVSRFF NSHSFLSSHG STPNTGVDLA
MKALAKLLKD PNPTVRQIAK DSYWCLWRKL PTQSELLLSK LEPKIIKIVE RSRPKDVSHE
EVSAPTLNMQ RSRPSLKETI IERNKDLRLK QRELNQSHRE ELHIKRVATR TNSTNGFRQN
SIERNLSNSH KPDLRPPSKE GVSPKDIEQE SVQQETTRTK QTDTAPASKE VAFDVQADPI
LKFLSSYQTD LIKEGINLLK YAIMGEEELS PEITSLLKSI SLRQPKLLEP LLLSNDNLFK
RSFQFFSAED FLRICSIVIN PIEGRTIELL ISMMTVDELY ESIIKLLSYS INTANILGDD
ELTMQVIKYK SSIIQLIVVF LQSSLEKIPI RDSYFSKVTS NFLELVSILK STDIYPEFSK
LLAKLYSINI ALFVSELDLV DINTKEEVEY IVGIDHTLSM KNIPNTMPNS LFELTEVQKT
HSYDGFSPVK TNQDFTMIWP ERKDNDDYNF IPKSANDSQK NIAAQFQGFN HHESKSEDPV
KEYSDNLAQV QICEQPPSLI DQNVQLQTFL DKVDPLKSIS NRNKPIAIYE DSKGSPQKLK
EHRYSEFNWF NFQVARLQLE SDDDEVEDNE TTEDDYSELL MDVCESLKSL ELDSKTLTTA
LDLLQNMHRF GFEFVKYYEN EGAKLMEESL WQFFHDCNKV SITNKVRGLV LLKQLLIIHS
KLDLANLWTT LINVACLPDS ENEIAFALRD ISSEILSGLY RSDELLDVLF SSFTSDHLSR
ASTFILGTLS KVLDSTSIPE LLSDSILQQI DRVLRNFVNS RNAECRRYAI LCYGKLVKSS
RVSFAGKSPD NTILDGIIQR FSPSQRRLVE YYSQDPKS
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