Gene PICST_78537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_78537 
SymbolYHM2 
ID4839371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp158682 
End bp159669 
Gene Length988 bp 
Protein Length301 aa 
Translation table12 
GC content46% 
IMG OID640390686 
Productmitochondrial carrier protein 
Protein accessionXP_001385050 
Protein GI150865718 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TCTTCATCCA TCATGTCTAA CAAAATCGAA AAGAAACCCA TCAACTTCTC CAACATCTTG 
TTGGGTGCTG GCTTGAACAT GGCTGAAGTG ACCACTTTGG GCCAGCCGTT GGAAGTCACC
AAGACTACCA TGGCTGCGAA CAGATCGATC ACTATGCCAC AAGCCATTAA GTTGGTATGG
TCCAGAGGTG GTCCTCTTGG TTTCTACCAG GGATTGATTC CTTGGGCCTG GATCGAGGCC
TCTACTAAGG GTGCTGTTTT GTTGTTTGTT TCTGCCGAAG CCGAATACCA GTTTAGGAAG
TTGGGCGCCA ACAACTTTGT CGCTGGTATG GGAGGAGGTG TCTCAGGTGG TTTAGCTCAG
GCTTACTTGA CTATGGGATT CTGTACTTGT ATGAAGACCG TCGAGATCAC GAGATCCAAA
CAGGTTGCTA CTGCTGGAGT TCCTCAGCAG ACGTCGTTCC AAGTTTTTAA GGAGATCTAC
AAGAAGGAAG GTATCAGAGG TATAAATAAG GGTGTCAATG CTGTAGCTAT CAGACAGATG
ACCAATTGGG GTTCCAGATT TGGATTTTCC AGATTGGCCG AAGAAACTAT CAGAAAGATC
AACAAAAAGG GTGAAGACCA GAAGTTGACT GCCATAGAAA AGATCCTTGC ATCTGTTATT
GGTGGTGGTT TGTCTGCCTG GAATCAGCCT ATTGAAGTGA TCAGAGTCGA GATGCAATCC
AAGACAAAAG ATCCAAACAG ACCCAAGAAC TTGGGTGTGC TCAGTACGGC TCAGTATATC
TACCTGAACA ACGGGATCAA GGGTTTGTAC CGTGGTGTCA CCCCCAGAAT TGGGTTGGGT
GTCTGGCAAA CAGTGTTTAT GGTCGCCTTT GGAGATATCT TCAAGAGAAT GTTGAATGCC
GACGGTGCTG GTCATTAGCC TACATAGATA CTTTATACTA AAACTCAACT TTTCGATTGA
CGTTTCTAAA TAATACAGAG CTAGAACT
 
Protein sequence
MSNKIEKKPI NFSNILLGAG LNMAEVTTLG QPLEVTKTTM AANRSITMPQ AIKLVWSRGG 
PLGFYQGLIP WAWIEASTKG AVLLFVSAEA EYQFRKLGAN NFVAGMGGGV SGGLAQAYLT
MGFCTCMKTV EITRSKQVAT AGVPQQTSFQ VFKEIYKKEG IRGINKGVNA VAIRQMTNWG
SRFGFSRLAE ETIRKINKKG EDQKLTAIEK ILASVIGGGL SAWNQPIEVI RVEMQSKTKD
PNRPKNLGVL STAQYIYSNN GIKGLYRGVT PRIGLGVWQT VFMVAFGDIF KRMLNADGAG
H