| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_77210 |
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| Symbol | QUP1 |
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| ID | 4837856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | - |
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| Start bp | 1698554 |
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| End bp | 1700665 |
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| Gene Length | 2112 bp |
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| Protein Length | 594 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640389171 |
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| Product | quinate permease |
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| Protein accession | XP_001383944 |
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| Protein GI | 150864928 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.436623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.677517 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GGAGCTTTAC GATTCAACTA TTTGATCTTT CGAGATCTGG AGCTATATAA AAGGAGCAGG
AGCCGTTGGT TTTGCAGTAC TCGGTTTACA GGTTAGCATC AGCATTTGGT TTTACTGGAT
AGGACGTTGG ACTAAGCTGA AATTTGTAAC AGCGCCGATC GTCACATGCC CACGGATAAA
TTATAGTCCG GAACCAGTGT ATATCTACTA TCTTCTGCTA TGAGCTTCAG CAACAAATCA
ACTGCATCCA CGCAACCTTA CGTGTCTCAA AAGGAAGACT CATCATTTTC GTCAGAATCC
GATCTTTCGG AGCTGCGCAA AAGAGCTACC AAGTCGAATA AGAAATCGAT GTTCCGATTC
AGAAACATTT TCCAGAAAGA TGAAGACAGA CCCACGCCCC CTGAGGTCTA TAACTATCGT
GTTTATGGCA CGGCACTCAT GGCATCAGCT GCTGCCATCA TTATTGGCTA CGACGGAGGG
TTTATAGGAG GAACGGTGGC TCTAGACTCG TTCAAAGACG AGTTCGGCCT CGATGGCCTG
CCCCATTCCA AATTCATTGT ATCCAACATC ATTTCGGTAT TCCATGCTGG CTGTTTTTTC
GGTGCACTTT TCTCGTATCC CTGCTCCTAC TACTGGGGTA GACGTATTTC CTTGATCATG
GCTGCTTTGT TAATCACTGT AGGCTCGGGC ATCATGTTGG CTGCTAGTAA ATCAGTAGGC
TTGGGTCCCA TTTACGCCGG CAGAGTTTTG GCAGGAATCG CAGTTGGATT TTCCACGAAT
TTGACAGTAG TGTACATCTC TGAAGTGGCT CCTCCAGCTA TAAGAGGCCA ACTTACGAGT
AGTTACGAAA TCGGCTGGAG AATCGGTGAC TTGGTTGGAT TCTGGATAGC CTACGCTGTC
GACTCACACA TCGCTCCAAC TAAAAAGCAA TGGTTTATTC CATTTGCAGT CCAGATGATT
CCAAGTGGTT TGTTCTTAAT TGGCAGTATT CTCATGAAGG AATCCCCCAG ATGGCTCTTC
CAAGTAGGCA GATACGACGA GGCCATAAAG AATTTGGTGT GGTTTAGAAA CTTACCTGAG
GACCACGAAT ATATTATCTA TGAAGTCAAC CAGGTCAAGG AGTCCATCAA CTATCAGAAA
GAACACGTTG GTTTAGGCAT TTGGGATCCC TTTGTCGAAG TGTTCTTCAG AAACAGAAAG
GTATTGCAGA GATTGTGCAT TACTTGTGGC TTATTTTTGT TCCAAAACTT CTTGGGTATC
CAGTCCATTA ACTACTACTC GCCGATTATT TTCGCTGGTC TTGGTGTCAA AGGTACTAAT
GCCACCTTGT TTTCTACTGG TATGTTTGGC GTGGTCAAGT TCATCTGTAC ATTCATCTAC
ATCATATTTA TTGTCGACAC CATCGGCAGA AGAAAAGCCT TCATGAGCTC GTCTGCTTTG
TGTTCAGTTT GTTTCTGGTA CATTGGCTCC TACTTGAAGA TTAACGATCC TACAAAACCC
GGTAACCTGG CAGGACCAGG TGGTAAAGCC GCCATAGGAT TTATGTATAT TTGGATCGCA
TCGTTTATTT TGGCTTGGTC CGGTGGACCC TTTGTTGTTG GTAGTGAAGT TTTTGATCAA
AACATCAGAT CCTTCGTCCA AGCTATTAAT GCTGCTGTTT CGTGGGTGCC TATTTTTATA
ATGTCGAGAT TTACTAATAA CATGATCGAC AAAATGCAAT ATGGTATCTA CTTCTTCTTT
GCCAGTTTGG CGATCTTGTC CATTCCATTT GTCTTCTTCT TCGTTCCGGA AACTAAGGGT
ATCGCCTTGG AAGACATGGA CAAGTTATTC GATTCTAGCT TAAGTGCACA TGCCGCTCAT
AAATTTGTCT TGAATAACGC TAGACTCGAA ACGGAAGCGA AGTTGAGCGA CAGGGATCTT
TTCAAGGTGG ACACTAACAA GTCAGTGGGC ATTGAAAAGA TAGAAAATAT TGACGACTCT
ATTTTGGTGC CTAACAAGGT TTAATCGAAA TAATAATCAG GAGAAATCTT GAGAACATAC
AAAAACAGAT AGCTGTAAAG TAAGTATAGC TTATAGTGAA GTTTGAATCT AATAATATAC
AAAGACTACT AC
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| Protein sequence | MSFSNKSTAS TQPYVSQKED SSFSSESDLS ESRKRATKSN KKSMFRFRNI FQKDEDRPTP
PEVYNYRVYG TALMASAAAI IIGYDGGFIG GTVALDSFKD EFGLDGSPHS KFIVSNIISV
FHAGCFFGAL FSYPCSYYWG RRISLIMAAL LITVGSGIML AASKSVGLGP IYAGRVLAGI
AVGFSTNLTV VYISEVAPPA IRGQLTSSYE IGWRIGDLVG FWIAYAVDSH IAPTKKQWFI
PFAVQMIPSG LFLIGSILMK ESPRWLFQVG RYDEAIKNLV WFRNLPEDHE YIIYEVNQVK
ESINYQKEHV GLGIWDPFVE VFFRNRKVLQ RLCITCGLFL FQNFLGIQSI NYYSPIIFAG
LGVKGTNATL FSTGMFGVVK FICTFIYIIF IVDTIGRRKA FMSSSALCSV CFWYIGSYLK
INDPTKPGNS AGPGGKAAIG FMYIWIASFI LAWSGGPFVV GSEVFDQNIR SFVQAINAAV
SWVPIFIMSR FTNNMIDKMQ YGIYFFFASL AILSIPFVFF FVPETKGIAL EDMDKLFDSS
LSAHAAHKFV LNNARLETEA KLSDRDLFKV DTNKSVGIEK IENIDDSILV PNKV
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