Gene PICST_75094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_75094 
Symbol 
ID4851345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp1554353 
End bp1555193 
Gene Length841 bp 
Protein Length217 aa 
Translation table 
GC content44% 
IMG OID640393053 
Productpredicted protein 
Protein accessionXP_001387942 
Protein GI126274386 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0564733 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CATCAAACAC CTCCTACCCC AATATATAAC AACATGGCCG ACAAGTTTCC TGCTATAGAA 
TCCGTAGATG ACGATTCAAT TGTCGCTGGA CAAGACGACG TCGCTGGTGC CGACTTCCTC
TCACGTGAGC AGGAGCTTCT TGGTGACGAG TTCAAGACCG AACAAGACCG AGAAGTGTTG
GCTGCTAGTG ACGATGAAAT AAACGAGTTC AACGAGCAGT TCCCCGATGT CGAAGAGAGT
GCTGCAGTTG CTGTGCCGGT TGTGGCCTCT GAAGCCGAAG ACGACTACGA ATTCTCCCAG
CCTGTTGCCT CCAAGTTTGA AGGTGAATCG GCTCCGTTAA AGGAGTGGAA ACAACGTCGT
GATTTGGAAA TCAGCGAAAG AGAAAGTGCC AACAGCAAGA AGAAGCAAGA AATCGTCGCT
AAGGCCCAAC AAACTGTTGA TGACTTCTAC GACAACTATA ATATCAAGAA GGAACAACAT
TCGAAGGAAG TCTTGAAGGA ACAGGACGAA TATTTGGAGA AGAGAGATGG TTTCTTGAAA
AGAGGAACTT TGTGGGATCG TGTCAACGAG ATTGTAAGCG AAGTTGGCGA CTTGCCAGAG
AGCGAAGACA GAGACAAGTC TAGATTCAAA GACTTGTTGG GCAAGTTGAA GGGCAAGGAA
AACGCTCCAG GTGCCGGAGG ATATTAAGAA GCGGATAAGA TGTAGACAAT GAAAAGCAAA
AGACATCTTT ATGAAAAGTT GAAGATATCT TGAAGCCAGC CTTATCAATT TCATTATCTT
AAAATGTCAA ACTGTACAAT TTAGATGTAG TAAAAGAATA GACACTATTC CATAAGATTT
C
 
Protein sequence
MADKFPAIES VDDDSIVAGQ DDVAGADFLS REQELLGDEF KTEQDREVLA ASDDEINEFN 
EQFPDVEESA AVAVPVVASE AEDDYEFSQP VASKFEGESA PLKEWKQRRD LEISERESAN
SKKKQEIVAK AQQTVDDFYD NYNIKKEQHS KEVLKEQDEY LEKRDGFLKR GTLWDRVNEI
VSEVGDLPES EDRDKSRFKD LLGKLKGKEN APGAGGY