| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_73203 |
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| Symbol | SEC62 |
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| ID | 4840050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | - |
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| Start bp | 766907 |
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| End bp | 767915 |
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| Gene Length | 1009 bp |
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| Protein Length | 280 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640391365 |
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| Product | subunit of ER protein- translocation complex |
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| Protein accession | XP_001385851 |
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| Protein GI | 126138656 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5232] Preprotein translocase subunit Sec62 |
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| TIGRFAM ID | [TIGR00869] protein translocation protein, Sec62 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CCAGGTCAGG CTAGCATGCC TATTCAGACT ACGAACGAGA GGTCGCCTGC GGCTCTCAAC
CTAGCATCGT ATTTGTACCA GAACTCTATT ATGAAACAGA GAACTGGACT TCTCAACAAT
GAAAGAGATA TCGAATTCTT CAGATACAAA CGTTTGAGCA GAGCCTTGCT TTCTGATGAC
TACAAGAGCA AGCAGCAGAA CGTTAAAAAC GGCTTGATCC CCATCAACAA TGAAACTGAT
GTTCAGAGAG TGTTGGTTCT CTTGATCCAA AATCAGTTGA TCTTACCTGT GGAAAAGCTT
CACTATGCCG AAATAAAGGC AATCAAGGGC TGGAAACCAA ACCGGACCAA GCCCACTTTA
AAGCGAATGG ATAAAGCTCA CGTGGACCCA GATGCATATT TTGCCTGGAT CTATACCAAA
CCTAACCCTT ACATCTTGTT GTATAGTATC TTGGCTGTGG CTGGTATCTT TGCTGTGATT
TTGTTTCCAT TGTGGCCCAG CTTCATGAAG AGAGGTGTGT GGTACTTGTC GATGGCTGCT
TTGGGACTTA TTGGTCTTTT CTTTGCAACT GCAATCGTTC GATTGATCAT ATACATCATA
TCCTTGGTAG CATTCCCCAA GCCGTTCTGG TTGTTCCCCA ACTTGTTTGA AGACTGTGGA
GTTCTTGAGA GTTTTCAACC TTTGTACGGG TGGGAGGAGC CAAAGAAGAA AAAGAGCAAG
AAGAAGAATG GTAATGAACC TGTTGCTGAA GTCAAGGCTA ATGGTTCCGC CGCTAATGGT
TCCGTAGCTA CTGGTGCTAA AGCTGGCGAA ACAAGCACTC AGAAACGTAG AGTGACTCTC
GAAGAAGTTG ACGAGTAGGT GAAATAGAAC GGAGTCGATA AAATGTACAA TGCTATAGAG
GAGGTTAGTT TAGAAGACTA CCGTAGATAT AGAGAGTATA AATGATATGA GACAATCACA
TCTTCTCACT ATATTGATGG TGAGCAAGTG TAGATTCGCT TCCATTTTC
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| Protein sequence | MPIQTTNERS PAALNLASYL YQNSIMKQRT GLLNNERDIE FFRYKRLSRA LLSDDYKSKQ
QNVKNGLIPI NNETDVQRVL VLLIQNQLIL PVEKLHYAEI KAIKGWKPNR TKPTLKRMDK
AHVDPDAYFA WIYTKPNPYI LLYSILAVAG IFAVILFPLW PSFMKRGVWY LSMAALGLIG
LFFATAIVRL IIYIISLVAF PKPFWLFPNL FEDCGVLESF QPLYGWEEPK KKKSKKKNGN
EPVAEVKANG SAANGSVATG AKAGETSTQK RRVTLEEVDE
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