Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_72817 |
Symbol | |
ID | 4839554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | + |
Start bp | 1161603 |
End bp | 1162428 |
Gene Length | 826 bp |
Protein Length | 218 aa |
Translation table | 12 |
GC content | 38% |
IMG OID | 640390869 |
Product | predicted protein |
Protein accession | XP_001384899 |
Protein GI | 126136751 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.613875 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTCAAAATTA AGTTTATATA ATGTCAATGG CGTATAATAG AAGTATCGGA AGTATATTAT ATCAGACTTC CAAGGAAAGT ATAAGGATTG GCAGTAATTA TCGAAGGTGC TTTTCTGTCT CCATTTCCAG ACACAACTTA TTTGGAGGAA CGAAGTCAAT AGGCAATAAG GGCCAACTCC TTACACCACC TTCGGGGAAG GGAGAAACGT CTTCGAATCC AGCCGATTTG TTCAAGAAAA ACGATATTTT GATGTACTCA GACAAGCCAC TAAACTACAT AGAGTCTGTG AAAGAAAATG GATTCCATTT GGCTAACAAC TTGCTCATCA CATCTCCAAA CAAACAGGGA GAGATAATTG GAGCGTTGAT GCTACAGAGT GAAACGTTCG AAGTCAATTT AAGCAACGAA GGGTATAAGA TTATAAACAA ATTTATTGTA GAATTCAATG AGGATGTTCT ACAAGTGTTC AAGAAAGTAC ATCCCAAGCC AGAAATAGTA GTGATAGGCT TGGGTGAAAA GTCAAGAATG TTGAGTGAGT CCAACAAGAG GTACTTTTCC AGCTTGGGTA TGCAGTTGGA AGTGGGGGAC TCTAACAATG CTGCCCAGAT CTTTGATCTT TTAGCAACAG AAAGACCAAA TGTGATTGGA GCACTCTTGC TTCCTCCAAA CGTATAGATA TTACTGTATG CTACGCAGGC TATCAATACT CTATAAGCTC TGTAGGCAGT GAATTATCAG TTCTGTACTT TCTATTGTTG ATAGTCGAGC TTTACTATAT AGCTCTACAG GTCTCTAGAC TACTGTAAAT AGTGAACAAT AACTTA
|
Protein sequence | MSMAYNRSIG SILYQTSKES IRIGSNYRRC FSVSISRHNL FGGTKSIGNK GQLLTPPSGK GETSSNPADL FKKNDILMYS DKPLNYIESV KENGFHLANN LLITSPNKQG EIIGALMLQS ETFEVNLSNE GYKIINKFIV EFNEDVLQVF KKVHPKPEIV VIGLGEKSRM LSESNKRYFS SLGMQLEVGD SNNAAQIFDL LATERPNVIG ALLLPPNV
|
| |