Gene PICST_72817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_72817 
Symbol 
ID4839554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1161603 
End bp1162428 
Gene Length826 bp 
Protein Length218 aa 
Translation table12 
GC content38% 
IMG OID640390869 
Productpredicted protein 
Protein accessionXP_001384899 
Protein GI126136751 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.613875 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTCAAAATTA AGTTTATATA ATGTCAATGG CGTATAATAG AAGTATCGGA AGTATATTAT 
ATCAGACTTC CAAGGAAAGT ATAAGGATTG GCAGTAATTA TCGAAGGTGC TTTTCTGTCT
CCATTTCCAG ACACAACTTA TTTGGAGGAA CGAAGTCAAT AGGCAATAAG GGCCAACTCC
TTACACCACC TTCGGGGAAG GGAGAAACGT CTTCGAATCC AGCCGATTTG TTCAAGAAAA
ACGATATTTT GATGTACTCA GACAAGCCAC TAAACTACAT AGAGTCTGTG AAAGAAAATG
GATTCCATTT GGCTAACAAC TTGCTCATCA CATCTCCAAA CAAACAGGGA GAGATAATTG
GAGCGTTGAT GCTACAGAGT GAAACGTTCG AAGTCAATTT AAGCAACGAA GGGTATAAGA
TTATAAACAA ATTTATTGTA GAATTCAATG AGGATGTTCT ACAAGTGTTC AAGAAAGTAC
ATCCCAAGCC AGAAATAGTA GTGATAGGCT TGGGTGAAAA GTCAAGAATG TTGAGTGAGT
CCAACAAGAG GTACTTTTCC AGCTTGGGTA TGCAGTTGGA AGTGGGGGAC TCTAACAATG
CTGCCCAGAT CTTTGATCTT TTAGCAACAG AAAGACCAAA TGTGATTGGA GCACTCTTGC
TTCCTCCAAA CGTATAGATA TTACTGTATG CTACGCAGGC TATCAATACT CTATAAGCTC
TGTAGGCAGT GAATTATCAG TTCTGTACTT TCTATTGTTG ATAGTCGAGC TTTACTATAT
AGCTCTACAG GTCTCTAGAC TACTGTAAAT AGTGAACAAT AACTTA
 
Protein sequence
MSMAYNRSIG SILYQTSKES IRIGSNYRRC FSVSISRHNL FGGTKSIGNK GQLLTPPSGK 
GETSSNPADL FKKNDILMYS DKPLNYIESV KENGFHLANN LLITSPNKQG EIIGALMLQS
ETFEVNLSNE GYKIINKFIV EFNEDVLQVF KKVHPKPEIV VIGLGEKSRM LSESNKRYFS
SLGMQLEVGD SNNAAQIFDL LATERPNVIG ALLLPPNV