| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_72239 |
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| Symbol | CTR9 |
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| ID | 4839733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | + |
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| Start bp | 1516491 |
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| End bp | 1520702 |
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| Gene Length | 4212 bp |
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| Protein Length | 1120 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640391048 |
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| Product | protein required for normal CLN1 and CLN2 G1 cyclin expression |
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| Protein accession | XP_001384981 |
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| Protein GI | 150865668 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3064] Membrane protein involved in colicin uptake |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0270618 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CACCAAAATA GCGGCCATGG CAGAGACCGT TGACGTTTCC TATTATCTCG GGGCACAGGC
GGCGGAGATT GGAGCCATTT TGGATGTTCC ATTATCCAAC GGGCAGATTG TCTCGATCAA
CTTAGTGGAT GAGCTTCCAG ACGACCCTGT AGAGTTGGAA TCGTTTTTAG AAGGAGAGAA
CTGTTCGAAA AAGTACTGGA TCAGCGTAGC TAGTGCCTAT GCACAATTAG GAAAGCTAGA
AGAAGCACTT CATATTATCC AAACGGCGTT GGACAAAAAT CCTGCTCATT TTTCTGATGA
AGACAACAAG CTGTTCCATT CTTTCTTGGT TTGGCTCTAT TTTAAGTTCG TTTCTCATGG
GATCGACAAG GAAAACTACT TGAAGAAAGC TGGCTCTGAA ATCAACAGTC TTGCTCAACG
TATCCGAGCT GATAACTCAA CGTCCACAAC CAATTCTACT TCGAATTTGT TGTCTCAAGC
TGTATTGCTT TTGTTCAACG GCAGAGATGA TGAAGCGTTG GATATCTTTG ACAAGATTTT
GCGCATTGAT CAGAATAACT GTTTTGCACT TTTAGGTAAA GCTCGTGCCG TCTTAAACAA
AACCAAGAAC TATGCGGCTG CTTTGAAGTT GTACCAGCAG GTCCTCATCT TGAATCCTGT
GATAAAGCCC GATCCCAGAA TCGGCATTGG GTTATGTTTT TGGTTCTTGA AGGATGACAG
AATGGCGGTT CAGGCCTGGA ACAGAGCCTT AGAGATTGAT CCGACCAATT TGAAAGCCAA
GGTGTTGTTG AACTTGGCCA ACTTCCAAAA GACGTTCATC AACTCTTTGA GTGACGATGA
GTTCTTGGAA AACTACAAGT CGTGTTTATC ACAGTTGGCT AGTAACCATA AAGAAAGCCC
TTCAGAATCT TCCATTCTTT TAGCATTGGC ATCGTACTAC TTCTCCAAAG AGAGTTACGA
TGTAGTTAGC AGTATAGTAG CTAAAGTAGT CAAGAACATG ACTGGGGACG AGAACTTGAC
TCGTTTCAAT AGCTTCAGTA AGGTCTCGAA GTACCAGTCC AATATCTTGT CCGAGTGTGC
TGCCTGGTTG GGTCGTATTG AATTCGTCAA AGCGAACTTT ACGCCCGCCT CCAAGTACTT
CCAGGAAGCT ATCAAGTTGA ACGACGCCAA TTTGCTTGCC AAGATCGGGT TGGGTCAGTC
TCAATACAAT CGTGGCTCTA TTGAAGAGGC TGTGATGACA TACGAATCAA TTTTGAGAAG
TAACGTCAAG TGTTTAGAAG CTAACTACGC ATTGGGCTTA CTCTATGCAA AGCAGAAATC
AAGAAAGAAG CAACAGGCAG CCATTCAGAT ATTGGAAAGG TACATTAGAT TGTCCAACAA
CTTGGGCTTA TCTGCCAGTC ATAAAGATGA AGACGGTTCG GAGTTCTTGA ACAAGGAACC
AATTACATTG AATGCGTATT TGGTGTTAAG CAAGCTTTAT GAGACAACCG ATATCAACCA
GTCCTTAAAC TACTTGAATA GGGCAATAGA GTCAAGAAAG CAGATTGGCA AGGATGTTCC
TTTGGAGGTA TACAACAACA TTGGGGTGTT CAATTTCATG AAACAGAACT ACGACGATGC
TGCCGCTCAT TTCCAAACAG CTCTTGATAT CGTCAAGAAC ACTGACCAGT TTGTCAGTGC
TGACGGAGAT GTCATGGTAG ACTTGCCAAC CGATTTGAAA ATCTCGTTGA CTTACAATTT
GGCCAGATCC AAGGAGATAT CGAATGAGTC TGAGGCTATA GACATCTATG AGCTGTTGTT
GGCAGAGTGT CCTAACTACT TCTCGGCAAA GATCAGAATT CTTTTCTTGA ACTGTGTCAC
TTCTCACAAG CTCAGCAAGG AAGATATTAA GGTCGAGATC GACCAGTTGT TGGCTGTGAA
CGCCTCAGAC TTGGAGATTA GATCCTTCTA TGGCTGGTTT GTCAAGAACT TTGGCAAGAA
GTTGGGATTA GCACCAGATG CTGATACAAA CCACCAAAAG GATACGTTAG TGGAATATGA
TTCGCATGAC TGCTATGCTT TGATATCGCT AGCCAATATC TACTGTATCA TGGCCAGGGA
TGTGAAATCA GGCCTGGAAG ACAAGAAGAA GAAGTACTAT GTAAGAGCCG TAGAGTTGTT
TGCCAAAGTG CTATCTGTGG ATCCAAAGAA TGTCTATGCT GCACAGGGTT TGGCTATAGC
ATACATTGAG AACAAAGATT CCGTTAAAGG ATTGGAGATC TTGAGAAAAA TCAGAGATTC
ATTGAACGAC ATCTCCATTT ATTTGAACTT GGGCCATGTA TTGGTAGAGT CCAAACTGTA
TGGCAAAGGT ATCGAGAATT ATGAGCTTGC CTTGGGCAGA TTCACAGACG GAAAGGATTC
GCGTATTCTT TCCTTCTTGG GAAGAGCATG GTACTTGAGA GCCAGTGCTG AAAAGAACTT
GAACTTCTTC AAGAAAGCCA TAGAGTATAC CGAGCTAGCC TTGGACTGTT CTACTGGGCC
CGGTTCTTCT ATTAGATTCA ACTTGGCATA TCTTCATTTC CAGATAGCTG AATTGATCAC
CAAACAGCCT GTGGGCCAAA GAAAGATAGA TGAGATCGAG GCTGCTATTG CTGGTTTGGA
ATCAGGAGTA GCAATCTTGA ACGAGTTGTC TTCTGAAGAC GAAAAGCACC CACCTTATCC
TAAGGCTGAG TTGAAAGCCA GAGCCAACTT GGGATCGACA ACGTTGTTGA ACAGATTGAA
CGGATGTCTT GAAGAAACGA AGAACAGCAT TGCTGCGATA GAAGAGAAGA TTGAAGTCGC
CAAGAAGTTG AGAAAGGAAG AAGAAGAGGA AAAAGAGAGA CTTGAAAACG AAAGACTTGC
AGCCGTTAAG GCCAAGGAAG AAGAGCTTGC TAAGGAAAGA GCAATCTTGC AAGAACAGGC
TCAGCAATGG GCCGAAGAAG CCAGAATGAA TATTGTAGTA GAAGATGACG AAGACGAGAA
ACTCTTTGAC GAAGAGTCCA ACAAGGACAA GAAGGAGAAG AAGCCCAAGA AGGTCACAAA
GGGTGCCAAA AAGAGAAGCA GAAAGAAGGC TGTTATTGAC GACAGTGAAG AAGAAGAGGA
AGAAGCCTCT GCTACTGACT CGGACGTTGA AGCCAGCTCT CCCAAGAAGA GGAAAACAGA
AGAATCAAAA CCTTCTTCGA AGAGAGGAGG AAAGAAGAGC TCTCTTTCTT CTGAATTCAT
TGCTGACAGC GACGAAGAGT TGGATGATGA TTTGTTTAAC GAGAATGGTG AGGAGGAAGA
AGAGGCTGAA GCATCTGGTG CTGAGGAAGA AAACGGAGAA GTCAACGGCC AGGCTGCTGT
CAAAGATGAT GATGAATAGT TGTACATTAC TGATCTATAA GTATTATAAT CTAAGATACA
TGTGTTATAT TAGTTACCAG ACGATAATGA TGTTGTAAAT CAGTTAACCG AATGATGACC
TGTTTAAATA GCCTAACGAA ATCATGAATT TGTACTGAAG TGAACCAAGA AATGCCGTAG
GTACGTTAAT TAGTCACTTC ATTGTATACA AGTTAACCAT ATCATGAATC GTTAGCAAGA
GTCGGTAGTT GCATCTCATT AAAAGTCGTT GTGATTTCAT TAAAGTAGAC TCTATGGAGA
GTTCTATTCT CTCCACCATC TTCTCATGTG TTTGTTGCTC TCCGATGTCA TTTTGAGTAA
TTTCTTCTCA AACTCATCTA GTGTATATAT GAACTCGTTG TTGATTTGTT TGTTGGCGTT
TCCAGCAAAA TTGCTGATCT CATAGGATCG TTCTTTCAAC ATTGCCATAG CCAAATCTAC
GAGTTCTTCA TTATCGAACA TGGAGCACCA TTTTTCCACC ATCTTATAGT AATTTGGAAG
AAGTTTGTGC AAGTCAACAG CAGTAGGAGA AGTCTTAATG GCGTTTTTTA CTTTTGTGGA
AATGCAGTCG GGCTCTGAAA GATCAACAAA ACTGTCGCCT GAACCTTTCA GAAGTTCACA
AACTGCCAAC ACCTCTGCAA GCCATGTGGG AAGTTCTAGT TTCGTATCTT TCTGAATGGC
TTTTCCCGGG TTTCCTTCGA GATATCCGAG GCCCGGAACC GTCATATTGA ATCGACAGGG
CACTTTTTCC GCATCCGCTA GAATTTCATC GAGGTCGTAG TAGTTGGACA TATGAAGTTA
TTAGTGATGT TA
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| Protein sequence | MAETVDVSYY LGAQAAEIGA ILDVPLSNGQ IVSINLVDEL PDDPVELESF LEGENCSKKY
WISVASAYAQ LGKLEEALHI IQTALDKNPA HFSDEDNKSF HSFLVWLYFK FVSHGIDKEN
YLKKAGSEIN SLAQRIRADN STSTTNSTSN LLSQAVLLLF NGRDDEALDI FDKILRIDQN
NCFALLGKAR AVLNKTKNYA AALKLYQQVL ILNPVIKPDP RIGIGLCFWF LKDDRMAVQA
WNRALEIDPT NLKAKVLLNL ANFQKTFINS LSDDEFLENY KSCLSQLASN HKESPSESSI
LLALASYYFS KESYDVVSSI VAKVVKNMTG DENLTRFNSF SKVSKYQSNI LSECAAWLGR
IEFVKANFTP ASKYFQEAIK LNDANLLAKI GLGQSQYNRG SIEEAVMTYE SILRSNVKCL
EANYALGLLY AKQKSRKKQQ AAIQILERYI RLSNNLGLSA SHKDEDGSEF LNKEPITLNA
YLVLSKLYET TDINQSLNYL NRAIESRKQI GKDVPLEVYN NIGVFNFMKQ NYDDAAAHFQ
TALDIVKNTD QFVSADGDVM VDLPTDLKIS LTYNLARSKE ISNESEAIDI YESLLAECPN
YFSAKIRILF LNCVTSHKLS KEDIKVEIDQ LLAVNASDLE IRSFYGWFVK NFGKKLGLAP
DADTNHQKDT LVEYDSHDCY ALISLANIYC IMARDVKSGS EDKKKKYYVR AVELFAKVLS
VDPKNVYAAQ GLAIAYIENK DSVKGLEILR KIRDSLNDIS IYLNLGHVLV ESKSYGKGIE
NYELALGRFT DGKDSRILSF LGRAWYLRAS AEKNLNFFKK AIEYTELALD CSTGPGSSIR
FNLAYLHFQI AELITKQPVG QRKIDEIEAA IAGLESGVAI LNELSSEDEK HPPYPKAELK
ARANLGSTTL LNRLNGCLEE TKNSIAAIEE KIEVAKKLRK EEEEEKERLE NERLAAVKAK
EEELAKERAI LQEQAQQWAE EARMNIVVED DEDEKLFDEE SNKDKKEKKP KKVTKGAKKR
SRKKAVIDDS EEEEEEASAT DSDVEASSPK KRKTEESKPS SKRGGKKSSL SSEFIADSDE
ELDDDLFNEN GEEEEEAEAS GAEEENGEVN GQAAVKDDDE
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