Gene PICST_70819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_70819 
Symbol 
ID4837344 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp2483473 
End bp2484350 
Gene Length878 bp 
Protein Length228 aa 
Translation table12 
GC content39% 
IMG OID640388659 
Producthypothetical protein, essential 
Protein accessionXP_001382703 
Protein GI150864027 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0845466 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AAATTAAAGA TGTCTGTGGG ATCCACATTG AACCAGATTT TACCTGTGGT AAGTTCAGAC 
CTAAAAAAGA AGAAAAGATC AGTTTTTGCT ATCAGAAACC TTTTTGCCAA AAGCGTTCGC
CTTACTAACC ACCTCCTATT AGCGTTTTCT AGGATTCATT CCTCTTTTCA TTGGAGTTGA
GATTGTTCTC GGAATTTCCA TCTTGAACAA AGCTGGAGGC GTTTACGGTA TCTTGTCGAT
CATAACGGGC CATCCACTCA ACTTCTGGCA ATGGCTCTAC AACATTTTGG CTATCTTTAC
ATTGCCATTC TACATTTCTG CATTGATTCA CTTGAGAGAC AAGCCTAGAA ATGTGAGGAA
ATTGTCACTT GCCACAATTG TCTATGTCTT GGATACAGCA ATAGGAATTT TTTATACATT
GTACTTTATC TATTTCTGGT TTAGTCTGGA AGATGTGTCT AGTGAAGAGA TTGAAAAAAG
AGCAGAAGTG TCTTCAGCTT TGTCATCGCA ATCAGCTTCC ATCGCTAGAG AGTTATACGT
GACTCTCAGC ACCACTATTG TGATCTCTGC CATCAGAATC TATTTCACAA TGGTGATAGT
ATCTTTCACG AGAGCATTGT TGAAGCAAGA TGTCAACGAA AACAGATACA ACGACAGTTC
AAGAACCGGC GACGACGATG ACGAACAGGA AGTCAATGCT TCCAAGGGAG TGTTAGGCGA
ATGGAAAAAG TTTGTGTTTG AGTTGGAGAT CAAGTCGAAG GAAGTGTTGA CTGCATTTTT
CAGAGGCTGA AGTTTTAGTG GTGATTCTGT TCGCTAATTT TTCCGAACAT AATACCATTT
TCATTACGTA TCGTACTAAT AAATGTAATA GACGTGAT
 
Protein sequence
MSVGSTLNQI LPVRFLGFIP LFIGVEIVLG ISILNKAGGV YGILSIITGH PLNFWQWLYN 
ILAIFTLPFY ISALIHLRDK PRNVRKLSLA TIVYVLDTAI GIFYTLYFIY FWFSSEDVSS
EEIEKRAEVS SALSSQSASI ARELYVTLST TIVISAIRIY FTMVIVSFTR ALLKQDVNEN
RYNDSSRTGD DDDEQEVNAS KGVLGEWKKF VFELEIKSKE VLTAFFRG