Gene PICST_70792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_70792 
SymbolYNG2 
ID4837243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp409553 
End bp410974 
Gene Length1422 bp 
Protein Length304 aa 
Translation table12 
GC content42% 
IMG OID640388558 
ProductIng1-like protein 
Protein accessionXP_001382841 
Protein GI150864134 
COG category[B] Chromatin structure and dynamics 
COG ID[COG5034] Chromatin remodeling protein, contains PhD zinc finger 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.368659 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATCTTCATCT CACCTATACT AGAAGCAGTA GATCTTCAGA AATAAGATGG ATACTTCGAC 
AGTGCTAGAA AAGTATACTC AGGATTTGTC CAACTTGCCT CTTGAGGTAA AGCATCTCTT
GGAAGAGATC AAAAGCAAAG ATATACAGGT GATGGAAGCC AGAAAACGGT ACCAGACAAA
GGACAACCAG ATTCACAAGT TCATCCGGTC TAATGGAACT CTTACCAAGC ATCCCAAGGA
ACAACAGTTG TATAACAAAA TAGAAGAGGA TATGAAGGTA ATGAAGAAGC TTCAGAAGGA
AAAGATTCTT TTGGCCAACA CGGCTTTGCT TTTGATATCC AAACATTTGT ACCATTTCGA
AACAGATATT GCCCGACTTG AACGTGACGA GATGTTGCCT CCTGTGGAGA ACATGTGGGA
AGAAGAAGGA GGTTCTGCGT TCAAGTCAGA TTTAAATAGT GCAAATGGCT TGTCGGACAG
TCTATCAGGT ACGCCGACTC CACGCAGTGG TACTGCTACT GGTACTCCTA CAGCTGAGGG
AATTCGTAAT AAGAAGAGAA AGCACATGTC AAGTGTGCGG ACCTCCGCCA GTATGAGTAA
CATTGCTAAT AGTAGGCCAA TAAAGAGATT GAGATCTGAA GAAGCAGAAG ATACACGCTT
TGGCGCCATG ATGAGGTCTT CGTCTGGACC AGGGTCATTA GAAGGACACA CACGAAACAT
TTCCGGACCA CACGAACATG GTCCTCTGGG AAATGGTGAG GATGCTGATA ACAACTTGTA
CTGTTTCTGC CAGAGAGTGT CTTTTGGAGA GATGATTGGT TGTGACAATG ACGACTGTAA
GTATGAATGG TTCCATTGGA GCTGTGTAGG GATTACGTCG CCTCCGAAGG ACGACGAGGT
GTGGTATTGT CCCGATTGTG CTCCTAAGAT GGAGAAGCGT AAGAAGAAGA GAAAGGTGTA
AAGAGATGTA GAGACAAGAT TAAGGCATAG ATGTTTCAAA GATCCGGAAC TATATGTGAA
TCTTTCACCT GTTCGAGTGC TGACTATGTG AGATCGATAA AGAGAGTAAG CCTACAGAGT
TAATTGTTTC AAAGGAGTGT TTACACAGTG TGTCTTACTA ACACTTTGAT TCTTCATATC
TATTACGTCT GAATCTTCCA TCACTCCTTA CTTAAGAAAG TGCTATTGTG GAAGTCGCGA
AGTCGGGTTC ATTCCTCAGA AAACCGACAA TAATCACCAC GTGATATGCG CGAAAATGAA
GAAAAAGATT CTGGAACGTG AAGGTTCAGG ATCAACAAAT CTGCGAAATA TCACTAGATA
GTGGACTCCC ATCTTCAGTT TATCTCCAGT CGTCTTCTAT ATCCTGGAGT ATCTGCAACT
GCTATTGCTA TAAATATTGC TATAGACATT GCCACTGACT AT
 
Protein sequence
MDTSTVLEKY TQDLSNLPLE VKHLLEEIKS KDIQVMEARK RYQTKDNQIH KFIRSNGTLT 
KHPKEQQLYN KIEEDMKVMK KLQKEKILLA NTALLLISKH LYHFETDIAR LERDEMLPPV
ENMWEEEGGS AFKSDLNSAN GLSDSLSGTP TPRSGTATGT PTAEGIRNKK RKHMSSVRTS
ASMSNIANSR PIKRLRSEEA EDTRFGAMMR SSSGPGSLEG HTRNISGPHE HGPSGNGEDA
DNNLYCFCQR VSFGEMIGCD NDDCKYEWFH WSCVGITSPP KDDEVWYCPD CAPKMEKRKK
KRKV