| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_70688 |
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| Symbol | DAD1 |
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| ID | 4837421 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 2466526 |
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| End bp | 2468501 |
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| Gene Length | 1976 bp |
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| Protein Length | 498 aa |
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| Translation table | 12 |
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| GC content | 46% |
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| IMG OID | 640388736 |
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| Product | highly conserved oxidoreductase |
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| Protein accession | XP_001382700 |
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| Protein GI | 150864024 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.743811 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GGCACTTTTG TATTCTACCA TCTGATACAC CCGCTCCCGT CGTGGTGTTC TGCTGTATTA
TTGTATATAC TGGATAGTGT GATTCACTAA CTAGTCACTC GGTTCCACAA CCTACACAGA
CCTACAAGAG TATCACTATC TGCTATATAT ATAGCCAATA CCGACTACTA CAGACTACTA
TCCAGAAAAT ACTACGTCTT ACCTTCTATA CCATCTGTCC CATCTACTGG ATCCGTCCCA
CACTATCTCC AAATGCCTGA CCGTCTAATA ACACGTTCTG AACCTTCGGG CAGACATGAG
GGCAAGAAAC ACATTATCAT AGTGGGAGCC GGTATCATCG GCGTGTGTAC CGCCTACTAC
ATCGTAAAAC ACCCCAAGTT TGATCCCAAC AAGTTCCACA TCTCGATCAT AGAAAGCAAG
AGAGTCGCTG GTGGAGCCTC TGGGAAAGCT GGAGGACTTC TTGCTCTTTG GGCTTTCCCC
CAGCAGATCG TCTCCTTATC CTTTGAGTTG CATCAGAAGT TGTCCAACTT GTACAACGGT
ACCGAAGAAT GGGGCTACAG GAGATTAACC ACTGTGTCGT TAGAAGGAGA TATCAGCCAC
TTGGACTCAG ACGAAGAGGG CGAGGACTCT AAAATCACCT TCAGAAACGT CAAGCTCGGC
AACAACCGAA CTGACGAAAC ATCATACCGC AAATCCGTGG CCCACGACAG CGACTCGTCG
TCGTCGTTGT CCGACAAACC ACCGAAGAAA TCGTCACGAG CCACCAGATC GTCGTCTGTC
GTTGCGGGTT CTACCACCAA GACCAAACTT CCCCAGGACT TGAACTGGAT CACATCATCC
CTTATAGAAA ACTGCACAAC GTTGGGTGGA ACAGACACAA CGGCCCAAGT ACATCCTTAC
AAGTTCACTA ACTTCATTCT CAAGAAGGCT GTAGAAGACA GTCAGGGTGC TATCGAACTC
ATCATTGGTA AAGTGAACGA AATTACCTAC TCTGTTGAAA CGGGTCTGGC TACGGGAGTA
ACATATCAAC CAACCAGCAT CAAAGACGAA GATAAAAACA GACAACCCAT CGACTTGCTA
GGTGACCAGA TCGTTTTGTC CGTGGGCCCC TGGACATCAA AGATCTTGCC TGATTGCCCT
ATATCAGGAT TAAGAGCCCA TTCCATCACC GTTGCTCCTT TCAAGGACCA ACCAGTTTCT
CCATATGCCA TTTTCACCGA ATTCAAAACA GGTGCGTACT CTTACATTTC TCCAGAAATC
TATGCTAGAC AAGATGAAGT GTATGTCTGC GGGGAAGGAG ACTCTGCTGT AGATGTTCCA
GAAACGACTG ATGATGTCGA AGTAGTTAAG TCCAAGTGTG ATGAGTTATT CAAACAAGTG
GGAAAGATCT CTCCCAACTT GAAGAGGGGC CACATCTTGA AGAGACAGGC TTGCTACTTG
CCTGTTTTGG ATGTGCCTTC TTCCAGTGGT CCGTTGATAG GCGAGACCAA TGTCACCAAC
TTATTCCTTG CATCTGGCCA TTCGTGTTGG GGCATCAACA ATGCTCCGGG TACCGGCAAG
ATATTGTCTG AACTCTTATT GGATGGCGAA GTGTCGTCAG CAGATATTTC TGCCTTGGAC
CCTTCGTTAT ATTTCGATGC CAGTGTGTTG GTGGAAGATG ACGACGACGA TGTAGAAGAT
CTTGACGATG ACGATGAGTT TTACGAAGAC GAAGATGATG ATGACGAGGA AGACGACATT
GACCCCTTGA GCAATGGGTA TAGCCACAAT CTGGCAGCCA GCAATGGCCG TCGAGCAGAT
GAAGAGAGCT CAGAAACCGG CCCCTCCGAT GCAGAATGGT CCAAATAGTA AATAAAGTAA
AGTAAAGTAA AGTGAGCATA AAGAGGTTCG TTCAACTTGC ATATATATCC TTTCCTCGAC
TTTTAATTGA TAATTTATGT TTTATTTAAT TTGATTTAAC GCTATTATAC ATGAGC
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| Protein sequence | MPDRLITRSE PSGRHEGKKH IIIVGAGIIG VCTAYYIVKH PKFDPNKFHI SIIESKRVAG
GASGKAGGLL ALWAFPQQIV SLSFELHQKL SNLYNGTEEW GYRRLTTVSL EGDISHLDSD
EEGEDSKITF RNKSSRATRS SSVVAGSTTK TKLPQDLNWI TSSLIENCTT LGGTDTTAQV
HPYKFTNFIL KKAVEDSQGA IELIIGKVNE ITYSVETGSA TGVTYQPTSI KDEDKNRQPI
DLLGDQIVLS VGPWTSKILP DCPISGLRAH SITVAPFKDQ PVSPYAIFTE FKTGAYSYIS
PEIYARQDEV YVCGEGDSAV DVPETTDDVE VVKSKCDELF KQVGKISPNL KRGHILKRQA
CYLPVLDVPS SSGPLIGETN VTNLFLASGH SCWGINNAPG TGKILSELLL DGEVSSADIS
ALDPSLYFDA SVLVEDDDDD VEDLDDDDEF YEDEDDDDEE DDIDPLSNGY SHNSAASNGR
RADEESSETG PSDAEWSK
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