| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_69759 |
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| Symbol | PNO1 |
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| ID | 4851998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 3386246 |
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| End bp | 3387075 |
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| Gene Length | 830 bp |
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| Protein Length | 257 aa |
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| Translation table | |
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| GC content | 43% |
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| IMG OID | 640393706 |
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| Product | Predicted RNA-binding protein Pno1p interacting with Nob1p and involved in 26S proteasome assembly |
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| Protein accession | XP_001387219 |
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| Protein GI | 126276263 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1094] Predicted RNA-binding protein (contains KH domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.227667 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGCTC CTACTGCTGT AAAGAACGTG GCGGAACCCG CTGTAGAGGT GCAGGCTATT
GCCCCTTCAT CCGTGGAAGA AGATGACGAA ATGCTCATTG AAGCTTCCAC AGTGCCGGTT
TCGAATCAAG CTGAGGCTGA AAAAAACACT AAAGAATCCG CTGGAGTTGT GTTGGATGAA
AGTGGAAAGC CCAAATTTAC TGCTGCTACC AATAGCGGAA TGAAGGTCAA GCTTGAGAGC
AGAAAAGTTG CTGTTCCACC ACACAGAATG ACTCCGTTGA AGAATGTTTG GCCCAAGATA
TATCCTCCTT TGGTAGACCA TTTGAAATTA CAAGTGAGAA TGAACCTTAA GACTAAAACT
GTTGAATTGA AAACGAACAA AAGCACAACC GATGTAGGAG CTCTTCAAAA AGGTGCTGAT
TTTATCAAGG CTTTCACTTT AGGATTTGAT GTAGATGACG CTATTGCCTT GTTGAGATTG
GATGATTTGT ATATCGAGAC TTTTGAAATC AAGGATGTTA AGACTTTGAC AGGCGACCAT
TTGTCTAGAG CCATCGGAAG AATTGCTGGT AAAGATGGTA AGACCAAGTT TGCCATCGAA
AATGCCACCA GAACCAGAAT AGTATTGGCA GACTCCAAGA TCCACATCTT GGGAGGGTTT
ACTCATATCA GAATGGCCAG AGAAGCTGTG GTGTCGTTGA TCTTGGGTTC TCCCCCAGGA
AAGGTCTATG GTAACTTACG TACAGTTGCC TCGAGAATGA AAGAACGTTA CTGATTCTCA
CTTTGCATTA TCCCTGTAAA TTAGTCGTAT AGAAATGAAG AAAAGTCATG
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| Protein sequence | MAAPTAVKNV AEPAVEVQAI APSSVEEDDE MLIEASTVPV SNQAEAEKNT KESAGVVLDE
SGKPKFTAAT NSGMKVKLES RKVAVPPHRM TPLKNVWPKI YPPLVDHLKL QVRMNLKTKT
VELKTNKSTT DVGALQKGAD FIKAFTLGFD VDDAIALLRL DDLYIETFEI KDVKTLTGDH
LSRAIGRIAG KDGKTKFAIE NATRTRIVLA DSKIHILGGF THIRMAREAV VSLILGSPPG
KVYGNLRTVA SRMKERY
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