Gene PICST_69737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_69737 
SymbolRT09 
ID4851900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp3135272 
End bp3136270 
Gene Length999 bp 
Protein Length313 aa 
Translation table 
GC content44% 
IMG OID640393608 
Productmitochondrial ribosomal protein S9 
Protein accessionXP_001387166 
Protein GI126275960 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0103] Ribosomal protein S9 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.383242 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATAGAAATGA GGCAATTTTC CAGCATAAGG GCTTTGAGAG CTCCCAGCCG GAGTTTCTCA 
CAAGCTGCTG TCCGTCTCGA GGAACACATT GAAGCCAGAC CACCTATCCC AGCTACATTG
AAAGCCAAAC TTGAGCAGAA CAGAGTCAGA ATAGCTGTAC AAAGCAATAT GAGTCGTACA
GGCTTGAACA ACTACGAATA CGAGCGCATC AGAGTGGTTC CTACTCTCAA AACTTTCTTT
GGAGGAAATC CTGTTCACGA CGAAAACATG AATGTTTTGA ATGGAGTTTT GAGAAAATAT
ATCGACTTGC CGACCCGAGT GCTTTCTGAC GAAGAACTCC GTACCAGCAA ATTCATCTCA
TTCGAGACAT ACAAGAAGAA GACCCAGTCT GGAACAAGAC TTAAAGACAT CCATTACAAG
GAGTTGACCA ACATTTTGCA TAGACTAAGA AGTATCAACC ATGAGTTGAT GCCTAGAGAA
GTCAGTGAAA TCCTAGAATC GTATCGAAGC ACTGCCAGTG ACTTCACGGG TGCAGCTAAG
AAGGCCAGGA CATTGGACGA AGAAGGTAAA GCCTACGGAA AATCTAAGAG AAAGGTCTCT
TTTGCTGAAG TGTGGTTGAC TAGAGGTGAA GGTGATACTT TGATCAATGG TAAATCGCTT
GTAGAGTACT TCCCTAAAGA CACGGACCGT AAGAAAATAG CATATCCTTT CCAGGTAATC
AGTCAGGAGG GTCAGTATAA TATCTTTGCC AAAGTTTCTG GTGGAGGTGT CACCGGACAG
ACTGAAGCTG TCATGTATGC CATTGCTAGG GCTCTCATTG TGTTCAACCC TTTGCTCAAG
CCTAGATTAT CCAAGGCTGG TTTGATGACT TCTGATGCCA GAAACGTCGA AAGAAAGAAG
CCTGGTAAGG TTAAGGCTAG AAAGTCGCCT ACCTGGGTTA AGCGTTGACC TCTTATACAT
ATCAATTCAT GTACATATCT ATACAATACA GTGTATCAT
 
Protein sequence
MRQFSSIRAL RAPSRSFSQA AVRLEEHIEA RPPIPATLKA KLEQNRVRIA VQSNMSRTGL 
NNYEYERIRV VPTLKTFFGG NPVHDENMNV LNGVLRKYID LPTRVLSDEE LRTSKFISFE
TYKKKTQSGT RLKDIHYKEL TNILHRLRSI NHELMPREVS EILESYRSTA SDFTGAAKKA
RTLDEEGKAY GKSKRKVSFA EVWLTRGEGD TLINGKSLVE YFPKDTDRKK IAYPFQVISQ
EGQYNIFAKV SGGGVTGQTE AVMYAIARAL IVFNPLLKPR LSKAGLMTSD ARNVERKKPG
KVKARKSPTW VKR