Gene PICST_69102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_69102 
SymbolRPL34 
ID4851061 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp850478 
End bp851426 
Gene Length949 bp 
Protein Length122 aa 
Translation table 
GC content37% 
IMG OID640392769 
Productribosomal protein L34 
Protein accessionXP_001387393 
Protein GI126274047 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2174] Ribosomal protein L34E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.933986 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CTTAGATAGT ATAGCATAAG TATCTTCAAC AATGGCTCAA CGTGTTACCT ACAGAAGAAG 
AAATCCATGT ATGTTTCTGC GGATCTACTC ATATGATGAA CTAGTCCTGA TAGAATGAAT
GACAAATGTA GATTATCAAA TTGTCAAGGC TTCGAGAAAG TGAAAAATTG ATTTCCTGTC
ACCAAAAAGA CTACATTACA TACTTCAAAA GTGAAGAACC TCATCCAGCA TGTTCCAGCA
CCTTGGTTCT AACGATGTAA ACTAGCAACA GCTTCGTGCC TTGTTCATTA TACACCGAAG
AAATTGTCAA AGTATCCATA GATATTGCCC AAGACCATGT AATCATAAAC GATGAGATGA
ATGAAAAACT TTTCCCTAAC GTCTCAGTTG CAATTGTCAT CATAGTACTA CCAATAAAAA
TAATAATATC GAATCAAACC AGTTCATTCC GATTTTGTCA TACTAGTTCA TTCATAAGCA
CAATATGAAA CCTTTCAATA TACTAACATA TATTTAGACA ACACCAGATC TAACAAGATC
AAGGTCGTCA AGACCCCAGG TGGTAAGTTG GTTGCCCAAC ACGTCAAGAA GGCTGCTTCC
AGAGTCAAGT GTGGTGACTG TGGTATCGCT TTGGCTGGTA TCTCCACCTT GAGACCAAGA
GAATACGCTC AAGTCTCCAA GACCCACAAG ACCGTCCAAA GAGCTTACGG TGGTTCCAGA
TGTGCCAACT GTGTTAAGGA AAGAATTGTC AGAGCTTTCT TAATCGAAGA ACAAAAGATC
GTCAAGAGAG TCCTCAAGGA ACAACAAGAA AAGGAAAAGA AGACCACCAA GAAGGTTTCT
AAGAAGTAAG CTAATCACTT CATAAAAGAT TTCAAATTGT AAATTTAGTC TTTGGTTTAA
TGGTATCTTC TATGTAAATT CTTTTCATTT AATACACAAA TACGTCAAT
 
Protein sequence
MAQRVTYRRR NPYNTRSNKI KVVKTPGGKL VAQHVKKAAS RVKCGDCGIA LAGISTLRPR 
EYAQVSKTHK TVQRAYGGSR CANCVKERIV RAFLIEEQKI VKRVLKEQQE KEKKTTKKVS
KK