| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_68429 |
|---|
| Symbol | FST13 |
|---|
| ID | 4841045 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009048 |
|---|
| Strand | - |
|---|
| Start bp | 136374 |
|---|
| End bp | 138135 |
|---|
| Gene Length | 1762 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640392360 |
|---|
| Product | fungal transcriptional regulatory protein |
|---|
| Protein accession | XP_001386626 |
|---|
| Protein GI | 150866884 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TGAACGCCGA GTACTGAGAA CAGCCCTTTC ATTGCCTGTA CCCTTCTAAG CAGCAAAAGC
TCTAGTTTAG CGTAGCACGA GCATAAATCA TCTTTCGTCT GCACCTGCCT GCAACCCCAT
AGCTTATTCT GTGAATAGGC ACATTTGAGG ATTATTTGAA TTTACTATAT CAGTACCACC
CAATTCCACT TCCAGCTTCC CAGCCAGTCT GATAGCTTCC CACGGAACCC AATCTAATAA
CTCCATAGTG CTCCGGCGCA TGTAATATAT TTATTTCCTT CTACTCATAC ATTTTTCAAA
GATAATAGAC TCTAGCAGAA TGCCACAACT TCCTTCTGTC TCCGAGCTCA TGATTTCCAC
GGCGGCCAAG CCTGTGGCCA CGAATTCACA TCCAGCATCG TCCACCGCTT CTAGCACGAC
TCCTCCGCCA ACCACGGTAC CTACTTATCA GCATACGAGA ACTCCCAGGT CTCCCTTGGT
GCCCAGGATA TCGTCCTTTA CATCTACTTC AGCGTACTCC CTACCACCCC CAGGACCCTT
GAGAAGGTTG ACAGACCCAA ATATTACAGC TACGGCCAAC TCAAGCAATA CCACAAGTCC
CACCAGCACA CATCCTTCAA ATCCGGTCAA TGGAGACTAC TTCAATCACT ACCAGATTAA
CCAAAGAACC TCGGTATCTT CTTCGATAGA CCCCTTGTCA AGGCAGGCCA GCAGTAACCA
GTTCAGCACA GTCAACTCGT CACCTCCTTT GACAAATCAA ACGACAACGA ACGTAGCGCC
TACTCTGAAC CCATACGCCT TTTCGTACGA GTCGTATCCC GCCAACGCTT CCTATCCAAA
TGGTTCTGCC GTTTACGGAA ACGCTATGGC TCCACCTCAA CCACACCCTC AGATGAATGG
CCCAGTGCAC CAGGCCCCTC CACCACCACC TCCAGGGTAT CCACAACATG CGTACTACTA
TCCCGCCATG TTTCCTCCTC CTCAGGCTAT GGGCCCGGCT CCGGGAGTGC CGCCTGGAGT
CCCAGGTGAG TATCCATACA TTTACGCAGC TAACGGCTAC TACCAATTAC AACAGCAGCC
CAATGCCGGT CCAGTGCCTT CTCACCAGGG AGCAGGCTCA CCATACGAAG AGAATAATGC
ATTGATGAAC AAGCGCCGCA TCATAAAGAG AAGAACCAGA ACCGGCTGCT TCACATGCCG
TAAGAGAAGG ATAAAGTGTG ACGAACGCAA ACCTACATGC TACAACTGTG AAAGATCCAA
GAAGGTGTGT CTTGGCTACG AGAACCTCAA CATAATCAAC AAGAAGAAGA GAGATACGTC
GCTAGACTTG GACCAGCAAC AGCAGCCGCA GGAACATCTT CACCAAGAAC ATCTTCATCA
AGAACATCTT CATCAAGAAC ATCTACACCA AGAACAGCTT CACCATGAAC AGCATCCGCA
ACACAGCGCC AGCTATCCCA CTTTACCAGC ACCCCAAGGC TACATTCCCA AGGCCACCAG
TATGATTCCC AACGGCAGAA CAGGTTCTAC GTCGGGATCT AACGGGAAGG TGTCAGTGCA
CGATTTGATT AAGTAGGAGA CGCCCTCAAG ACTTCGGCAA GTTCTTGTGT TGCAGCCGCT
CAAGATAAAG CATTATGGGC TTGGATAATA ATTCATGAGC TGATTCTGCT ACGAATGTTA
CGACGATAAT ATATGTATGC TCTACGTACA AGCGTATATA ATAAATGCAT AGCCATGTCG
AAAGAATGGT GGAATTCAAT AG
|
|---|
| Protein sequence | MPQLPSVSEL MISTAAKPVA TNSHPASSTA SSTTPPPTTV PTYQHTRTPR SPLVPRISSF
TSTSAYSLPP PGPLRRLTDP NITATANSSN TTSPTSTHPS NPVNGDYFNH YQINQRTSVS
SSIDPLSRQA SSNQFSTVNS SPPLTNQTTT NVAPTSNPYA FSYESYPANA SYPNGSAVYG
NAMAPPQPHP QMNGPVHQAP PPPPPGYPQH AYYYPAMFPP PQAMGPAPGV PPGVPGEYPY
IYAANGYYQL QQQPNAGPVP SHQGAGSPYE ENNALMNKRR IIKRRTRTGC FTCRKRRIKC
DERKPTCYNC ERSKKVCLGY ENLNIINKKK RDTSLDLDQQ QQPQEHLHQE HLHQEHLHQE
HLHQEQLHHE QHPQHSASYP TLPAPQGYIP KATSMIPNGR TGSTSGSNGK VSVHDLIK
|
|---|
| |