Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_68064 |
Symbol | |
ID | 4840023 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | - |
Start bp | 633382 |
End bp | 634708 |
Gene Length | 1327 bp |
Protein Length | 262 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640391338 |
Product | predicted protein |
Protein accession | XP_001385821 |
Protein GI | 150866277 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.107396 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CGATATTGGA GACCTTGCTC TAGCATATAT CAACAGAGTA ATTCCCGAGT TATCCAACAT TTTTAGTTGT ATCAATCCAA CAAAGATGTC CACCCCCTCA AATACTGCTG CTACTCCAGC TTCCTCGGCT AAGTTTGACC AGGAAAAGTT ATTGGCCACT GTTAAGGTAA GTACATAATT CAGAAGAAAG AAAAGAGATC GCAATTGAAT TGATGCTTTA GGTCTGACTC CATTACATCC ACATTCAAGT CATTGAGTCC ATTAGTACGT CTGACAAGGT TTGCTCGAAT TTATTAATTT GTTGACATTG AATTATTCAT AGATCTCATT TTTTAGACAC CTTTCATGAA TTTTCGGATT ACTAACATAT TTACCATATA GACTTCGCAA TTTGCCTGGT TTGTCGGCCA TCTCGTCACC TTGATCAGTG TCTTCTTCTA TGTGCTCACT TACATCAAGT TCGGTGTTGG CCTTTACAAG TTCTGGTTCG TGTTGGCCCT TGTAGGAGTT GTTGAAAGTT TCGGAATCTT GGTATTCCAA TCTATCAAGA AGAATGGGTT TGATTTCGGC CAGTTGATCA AAGACGATAA CACCTTCTAT TTCCTTCTCG GATCGTTGTT GTTGTTCGTC AGATCGCGTG TGTTGTTGAC GTTGTTGCCA TTTGGCTTGT TTTCGTTCTA CCACGTCTTG ACGTACGCCA ACGGCTACAT TTTGCCCATC TTCAACTTGG AAAACTCGGC CATCTCATCC AAGATCGGTT CCTTTGTAGC CAACACTAAC AACAAGTCGA TCCAGTTGGC TGCTCTCTTG GAAGTCGTCA CCTACGGGTA CTTGTTCCTC AGAGTGATTG CCTTCAGAAA GAGATCATTG TCTCCTTTCC TTATCTACAC TGTGTTTTTG AAGAAGAAGT TCGAGACCTC TGTCTACACC AGAAACTACT TCAAGGCTGC CGAGGTCCAA GTGGACAACG TCGTCAACCA GATCGGCCAG CCTCAGGTCA AGAAGGTGTG GATCCAGATC AAGGATGTGT TCAAGAAGAT CGGTACTGTC CACTTGGTCC ACGATCCTAC CAAGGACAAG CTGATCTAGG CCCCTAAGAT ATACAACAAA TTCTATCTCA ATTATCTGCT CATTTGTCTA CTCAATTGTT TGCTGACTTG TCTACAGATT TGTCTACTCA ATTGTCTACT CAATTGCTCA ACTACGTTTA CTATTGAGTT ATGGTGTGTT GTAGAATCAA CCAGTACTGG AACACTCCGT CGTCGTTTGT TATTGTAACG TGTATATGTA TATTGCTGTT TGTAGTAAGT AACACCTTTT TTATCGC
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Protein sequence | MSTPSNTAAT PASSAKFDQE KLLATVKTSQ FAWFVGHLVT LISVFFYVLT YIKFGVGLYK FWFVLALVGV VESFGILVFQ SIKKNGFDFG QLIKDDNTFY FLLGSLLLFV RSRVLLTLLP FGLFSFYHVL TYANGYILPI FNLENSAISS KIGSFVANTN NKSIQLAALL EVVTYGYLFL RVIAFRKRSL SPFLIYTVFL KKKFETSVYT RNYFKAAEVQ VDNVVNQIGQ PQVKKVWIQI KDVFKKIGTV HLVHDPTKDK SI
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