Gene PICST_68064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_68064 
Symbol 
ID4840023 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp633382 
End bp634708 
Gene Length1327 bp 
Protein Length262 aa 
Translation table12 
GC content42% 
IMG OID640391338 
Productpredicted protein 
Protein accessionXP_001385821 
Protein GI150866277 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.107396 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CGATATTGGA GACCTTGCTC TAGCATATAT CAACAGAGTA ATTCCCGAGT TATCCAACAT 
TTTTAGTTGT ATCAATCCAA CAAAGATGTC CACCCCCTCA AATACTGCTG CTACTCCAGC
TTCCTCGGCT AAGTTTGACC AGGAAAAGTT ATTGGCCACT GTTAAGGTAA GTACATAATT
CAGAAGAAAG AAAAGAGATC GCAATTGAAT TGATGCTTTA GGTCTGACTC CATTACATCC
ACATTCAAGT CATTGAGTCC ATTAGTACGT CTGACAAGGT TTGCTCGAAT TTATTAATTT
GTTGACATTG AATTATTCAT AGATCTCATT TTTTAGACAC CTTTCATGAA TTTTCGGATT
ACTAACATAT TTACCATATA GACTTCGCAA TTTGCCTGGT TTGTCGGCCA TCTCGTCACC
TTGATCAGTG TCTTCTTCTA TGTGCTCACT TACATCAAGT TCGGTGTTGG CCTTTACAAG
TTCTGGTTCG TGTTGGCCCT TGTAGGAGTT GTTGAAAGTT TCGGAATCTT GGTATTCCAA
TCTATCAAGA AGAATGGGTT TGATTTCGGC CAGTTGATCA AAGACGATAA CACCTTCTAT
TTCCTTCTCG GATCGTTGTT GTTGTTCGTC AGATCGCGTG TGTTGTTGAC GTTGTTGCCA
TTTGGCTTGT TTTCGTTCTA CCACGTCTTG ACGTACGCCA ACGGCTACAT TTTGCCCATC
TTCAACTTGG AAAACTCGGC CATCTCATCC AAGATCGGTT CCTTTGTAGC CAACACTAAC
AACAAGTCGA TCCAGTTGGC TGCTCTCTTG GAAGTCGTCA CCTACGGGTA CTTGTTCCTC
AGAGTGATTG CCTTCAGAAA GAGATCATTG TCTCCTTTCC TTATCTACAC TGTGTTTTTG
AAGAAGAAGT TCGAGACCTC TGTCTACACC AGAAACTACT TCAAGGCTGC CGAGGTCCAA
GTGGACAACG TCGTCAACCA GATCGGCCAG CCTCAGGTCA AGAAGGTGTG GATCCAGATC
AAGGATGTGT TCAAGAAGAT CGGTACTGTC CACTTGGTCC ACGATCCTAC CAAGGACAAG
CTGATCTAGG CCCCTAAGAT ATACAACAAA TTCTATCTCA ATTATCTGCT CATTTGTCTA
CTCAATTGTT TGCTGACTTG TCTACAGATT TGTCTACTCA ATTGTCTACT CAATTGCTCA
ACTACGTTTA CTATTGAGTT ATGGTGTGTT GTAGAATCAA CCAGTACTGG AACACTCCGT
CGTCGTTTGT TATTGTAACG TGTATATGTA TATTGCTGTT TGTAGTAAGT AACACCTTTT
TTATCGC
 
Protein sequence
MSTPSNTAAT PASSAKFDQE KLLATVKTSQ FAWFVGHLVT LISVFFYVLT YIKFGVGLYK 
FWFVLALVGV VESFGILVFQ SIKKNGFDFG QLIKDDNTFY FLLGSLLLFV RSRVLLTLLP
FGLFSFYHVL TYANGYILPI FNLENSAISS KIGSFVANTN NKSIQLAALL EVVTYGYLFL
RVIAFRKRSL SPFLIYTVFL KKKFETSVYT RNYFKAAEVQ VDNVVNQIGQ PQVKKVWIQI
KDVFKKIGTV HLVHDPTKDK SI