| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_67999 |
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| Symbol | SMI1 |
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| ID | 4840142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | + |
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| Start bp | 217080 |
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| End bp | 218804 |
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| Gene Length | 1725 bp |
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| Protein Length | 523 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640391457 |
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| Product | Protein involved in (1,3)-beta-glucan synthesis |
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| Protein accession | XP_001385378 |
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| Protein GI | 150865953 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4282] Protein involved in beta-1,3-glucan synthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.14385 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AATCATCACA ATAACATTTC CACCTCATTT ACATTACATT CACTATGGGG TTGATGGATA
ACTTCAAGGC TTTCGTGCAT CTGATCACCA CAGATGACCA CTACGCTACA TACGACTCTC
CTTACAAACA TACCGGCAGT GCCAATGGTA GCAATGTCGA AGGAGGCTCA GGAGCTAATG
GATCGTCGTC CAGACTTTCC GAACTCAACC GTCTCAATGC GTACCAAAAC TCTTCGAGTC
ATTCTCTTGT AGACGGCAGT CGCAACAGCT CAACTTCCAA TGTAGGCTAC AGACCTGGTC
AAAAGTCGTC TGGAACTGTT ACTGAGTACC CTTTGCAAAC TTTGAACCAG AGCGGACAAC
CTCCTCTACC AACCATTGAC TCGCTTTGGG ACAGAATCGA AAGTTGGATC GACGATGAGT
ACCCCGAGTT GGAAGACTAC TTGAACGATG GAGTCACCAC TGCCGACTTG AACGAGTTTG
AAAACGACTT GGGCTGTGGT TCGCTTCCTG TAGAATTCAG ACAATTCTAT AAGAGACACG
ATGGCCAATT TCGTGGAGGT AAGCCAACCG GTTTGATCAT GGGCCTAGCT CTTTTGGACT
TAGAGGGAAT TGCTGAAGAG TATGCTGTCT GGTCCAAAGT AGCCCAAAGG TTGGAAGGTC
AACAGTACAT TGTTCAACAG CAACAACAAC AGCAGCAAAA AGAAACTTCC TCCAGTGCTG
CCACCGCTAC TCAAAGACCT TTAAGCAATA CATTCATAGC TAACCAGAGA TCTATTCCAC
CTAACTCGGT GCAGCCATAT TATTACCACA AGGGCTGGGT TCCTATCTTG AAGGACCACA
TTGGTAACCA GATAGCATTG GATTTGGCAC CAGGTCCTCA GGGTATATGG GGACAAGTCA
TAATATTCGG AAGAGATTAC GACACCAAGT TGGTTGTAGC TTCGAGTTTC CAAGAATTTA
TTTTCAACTT CGTCAATGAT TTAGAAGCAG GAAATTACGA AATTGACTCC GCTCAACTTC
ATGAAGATTT GGGATACCTC TCGAACTCCA GAAACGACGA CTACATGATT GGCGATGAAG
ACGAAGACCA AGGTGAATTG ACTTTTTACG ATCAGGGTGG AAAGGAGTTC GGCAAGGGTG
CCCTCAAAGG AGTTTCTAGT TACGTTGAAG TTATCAAGAG AAGATCGTTG AAGAAATATG
GTTTGACAGA AAACTTCTCG ACTACTTTCA CTCCTGTAAG GGTTCCAGTT AAGAAACCTG
CGGCTCCATC TGCCACTGAA AGCGGCTCCA ACACTCCCTT GAGAGCTCAA AGTCCTTCCT
TGGGGCAGTC GAGCACTGCT GCTAAAAGTT CTGGATCCAG TCCGTTGATC AATGTAGAAT
CCGCCAACAA GAGTGTAACT TTACAAAGAG AAACCATTAT CGACGACAAG CTCGAAACTG
AGACAGAAAA CAAAATCGAA GACAAGATAA TAAAAGAAGA ACCAGAAATA GCCTCCAAAA
CAGAGGAATC GGATGATGCT CTTGTAACTG CGGAAGAATC TGAGCAGCCA GAAGATCAGC
CTTTGATCGA AGGATCTGAA GGAATTGAAG AAGGCTTGAA GGACGTTGCT TTATAGATTT
TTGTCGTTTA CTTTGTATTT TCCTCACTTA TACCAGTGAA TTCAGTCCGG GTTATTCAAA
TTATCACCTA TCCTATCGTA TATATATAAA TCCATATTAG TCATT
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| Protein sequence | MGLMDNFKAF VHSITTDDHY ATYDSPYKHT GSANGSNVEG GSGANGSSSR LSELNRLNAY
QNSSSHSLVD GSRNSSTSNV GYRPGQKSSG TVTEYPLQTL NQSGQPPLPT IDSLWDRIES
WIDDEYPELE DYLNDGVTTA DLNEFENDLG CGSLPVEFRQ FYKRHDGQFR GGKPTGLIMG
LALLDLEGIA EEYAVWSKVA QRLEGQQYIV QQQQQQQQKE TSSSAATATQ RPLSNTFIAN
QRSIPPNSVQ PYYYHKGWVP ILKDHIGNQI ALDLAPGPQG IWGQVIIFGR DYDTKLVVAS
SFQEFIFNFV NDLEAGNYEI DSAQLHEDLG YLSNSRNDDY MIGDEDEDQG ELTFYDQGGK
EFGKGALKGV SSYVEVIKRR SLKKYGLTEN FSTTFTPVRV PVKKPAAPSA TESGSNTPLR
AQSPSLGQSS TAAKSSGSSP LINVESANKS VTLQRETIID DKLETETENK IEDKIIKEEP
EIASKTEESD DALVTAEESE QPEDQPLIEG SEGIEEGLKD VAL
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