Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_67709 |
Symbol | |
ID | 4838832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | - |
Start bp | 1705589 |
End bp | 1707583 |
Gene Length | 1995 bp |
Protein Length | 625 aa |
Translation table | 12 |
GC content | 45% |
IMG OID | 640390147 |
Product | hypothetical protein |
Protein accession | XP_001384634 |
Protein GI | 150865422 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.768048 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGCTG ACAAACAATC ACTTCCTACC GGCACTGGAA CTGGTTCCGC CACTGGTGCT GGTTCGGGCA TTCGATTGCC ATCCATCTCG TTTCTTCTGG GGTCCTCTGG TAGTAGCAAA CTTCCCCCAG CTGCCAACAT GGGCATTTCC AGCTTCTTGA ACAATACCTC GGCTCCAGAC CCGTCGTCTC AGATTCAACC AAAAGCCAAA CGTGTCAAGC ACGAACAGCC AGAAACGCAA ACGCAGGTGC AGCCGTCGGA GGATCAATCG CAAGCGCAAG CCCAACTTCA GACGCACTCA CAAGCTATAG CACAATCTTC GCAAAATCAG TATGGAACCT ATTCCCACGA CTACAACTCG GGTTACCCGC AACCAGAACA TACCAAAACG TATAGACCAA TTGAGCAAGA ACCAACTCAG ACTCAGAAAG CGCAATTGCA GCAAACGCAA ATCCAACCTC AGTTTCAGCC GCACCAAAAT CCTCAGGCGC AAACTCAGAC TCAGTCTAAG GCTTCACAGA CATCCTCTAC AAACGCAACA AACGCACCAA GTCCTCCTGC TATACCTACA GAAACTAACA AACAGTACGC AGACCAGGAC CCGCACCGTC ACCATCACCA TCATCATCAC CATCATCACC ATCCACATCA CCATCACCAC CATCACCATT CGCACCCCCA GCCAGGCTCA GAACAATCTG GAATACCTCA CATTCACTCA GGAAATCATA TACATGTTCT TGCACCTGAA CTGGTGAAAC AGGAAGGGGT GGCTAAACCA AACGATGATG TAGATATTAC CAATCCAGTA CAACATCTTG AGGACACTGA GTCTGAACAA CAAACAGCTG CAGGCATTCT AGAAGCAACA AAAGATGTTG AGTCTGCCAA GTCTTTGTTG CCTCCACAAA GAGCTCTCAG AGAGAAAGTG GAATTCAATA CCGTTCCTCC CGTATCCTTG AACGTGCAGC CTGTATTACA ATTTATCAAG GAAAAGTTTC CACAACGTCG CCACCTTGGC ACGATTGTCT ATAATCCCAC GACTACGTGG TCCAACTTGC AGACTTCACA GCTCTATGGC TTAAAGCCAG GACATGTTGA AGAATTCGAC ATCTTGAAGG AACGATATGA ATCAAAATCT AAAGAGGTGT GTTTCCAGAA AAAGTATATC CCCTCGCTCC CACCATTGAC CGCAGATTAC ATAAATAGCA TAGTGGAAAT CAAAATCCCC TTCCATTTCA TTGACAAGTT CATCCACGAG TTCGAGTCAT CGGTAATAAT AAAAAGAGAG TTGTGGGGTG GCGCCAGTGG TGCCTATACC GATGATTCTG ACATTCTCAG TATTTTGGCC CACAACGGAT TCTTCCACGA CAAGATGGAC CTCACGCAGT GGAACCCGAA CTGGACCAGG AATGACATAA TAAAGCCATT GAACATTAAC GTTAATGCCG ACAGTAAAGC GCCTCCTTCT GAACAAGACA GTGACGAACA TGCTGAGATC TACGGTGATT TATCGGTAGA GTTACTCTTG TTGCCCCCTC TTCCAGAATA CCATGGCTTT TATGCCAATG GCATTAATTC TCGATCGTGG ACCTCGGCCA ACAAACACAA TGGACTATCC ATTGCTGTGT ACAATGTCAA ATGGGAAAGC TTCGGTGCCC ATTTGCGTAG TAGATTGATT TCGAAGAGGT CTGCTCTGGA ATTGGCCAAG GACTCCAATG ATAACGCGAA AGTTCTAAAT GGGAAAAGAG GATGGAGCTT TGATTACGCA TACTATAAGC AGTTGAAAAA TAAGTTTGCT GCTCTAGACA CCGAAGCAAA AAATAGTGCT GTCGAAACTA ACGGTGGTAA GGTTGTCGCA GCCAATCTGG TATCATAGAT GCTACTACTA AGTTTGTATA ATTTCGAAAT GATTGCTGTA AAAATTACAT AGTTATGTCA TAGTTTCTTC ACGAACGTTA GAATAGATTT AAAAATGGTT GCAAATATTT TGTTC
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Protein sequence | MSADKQSLPT GTGTGSATGA GSGIRLPSIS FLSGSSGSSK LPPAANMGIS SFLNNTSAPD PSSQIQPKAK RVKHEQPETQ TQVQPSEDQS QAQAQLQTHS QAIAQSSQNQ YGTYSHDYNS GYPQPEHTKT YRPIEQEPTQ TQKAQLQQTQ IQPQFQPHQN PQAQTQTQSK ASQTSSTNAT NAPSPPAIPT ETNKQYADQD PHRHHHHHHH HHHHPHHHHH HHHSHPQPGS EQSGIPHIHS GNHIHVLAPE SVKQEGVAKP NDDVDITNPV QHLEDTESEQ QTAAGILEAT KDVESAKSLL PPQRALREKV EFNTVPPVSL NVQPVLQFIK EKFPQRRHLG TIVYNPTTTW SNLQTSQLYG LKPGHVEEFD ILKERYESKS KEVCFQKKYI PSLPPLTADY INSIVEIKIP FHFIDKFIHE FESSVIIKRE LWGGASGAYT DDSDILSILA HNGFFHDKMD LTQWNPNWTR NDIIKPLNIN VNADSKAPPS EQDSDEHAEI YGDLSVELLL LPPLPEYHGF YANGINSRSW TSANKHNGLS IAVYNVKWES FGAHLRSRLI SKRSASELAK DSNDNAKVLN GKRGWSFDYA YYKQLKNKFA ALDTEAKNSA VETNGGKVVA ANSVS
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