Gene PICST_67709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_67709 
Symbol 
ID4838832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp1705589 
End bp1707583 
Gene Length1995 bp 
Protein Length625 aa 
Translation table12 
GC content45% 
IMG OID640390147 
Producthypothetical protein 
Protein accessionXP_001384634 
Protein GI150865422 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.768048 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCTG ACAAACAATC ACTTCCTACC GGCACTGGAA CTGGTTCCGC CACTGGTGCT 
GGTTCGGGCA TTCGATTGCC ATCCATCTCG TTTCTTCTGG GGTCCTCTGG TAGTAGCAAA
CTTCCCCCAG CTGCCAACAT GGGCATTTCC AGCTTCTTGA ACAATACCTC GGCTCCAGAC
CCGTCGTCTC AGATTCAACC AAAAGCCAAA CGTGTCAAGC ACGAACAGCC AGAAACGCAA
ACGCAGGTGC AGCCGTCGGA GGATCAATCG CAAGCGCAAG CCCAACTTCA GACGCACTCA
CAAGCTATAG CACAATCTTC GCAAAATCAG TATGGAACCT ATTCCCACGA CTACAACTCG
GGTTACCCGC AACCAGAACA TACCAAAACG TATAGACCAA TTGAGCAAGA ACCAACTCAG
ACTCAGAAAG CGCAATTGCA GCAAACGCAA ATCCAACCTC AGTTTCAGCC GCACCAAAAT
CCTCAGGCGC AAACTCAGAC TCAGTCTAAG GCTTCACAGA CATCCTCTAC AAACGCAACA
AACGCACCAA GTCCTCCTGC TATACCTACA GAAACTAACA AACAGTACGC AGACCAGGAC
CCGCACCGTC ACCATCACCA TCATCATCAC CATCATCACC ATCCACATCA CCATCACCAC
CATCACCATT CGCACCCCCA GCCAGGCTCA GAACAATCTG GAATACCTCA CATTCACTCA
GGAAATCATA TACATGTTCT TGCACCTGAA CTGGTGAAAC AGGAAGGGGT GGCTAAACCA
AACGATGATG TAGATATTAC CAATCCAGTA CAACATCTTG AGGACACTGA GTCTGAACAA
CAAACAGCTG CAGGCATTCT AGAAGCAACA AAAGATGTTG AGTCTGCCAA GTCTTTGTTG
CCTCCACAAA GAGCTCTCAG AGAGAAAGTG GAATTCAATA CCGTTCCTCC CGTATCCTTG
AACGTGCAGC CTGTATTACA ATTTATCAAG GAAAAGTTTC CACAACGTCG CCACCTTGGC
ACGATTGTCT ATAATCCCAC GACTACGTGG TCCAACTTGC AGACTTCACA GCTCTATGGC
TTAAAGCCAG GACATGTTGA AGAATTCGAC ATCTTGAAGG AACGATATGA ATCAAAATCT
AAAGAGGTGT GTTTCCAGAA AAAGTATATC CCCTCGCTCC CACCATTGAC CGCAGATTAC
ATAAATAGCA TAGTGGAAAT CAAAATCCCC TTCCATTTCA TTGACAAGTT CATCCACGAG
TTCGAGTCAT CGGTAATAAT AAAAAGAGAG TTGTGGGGTG GCGCCAGTGG TGCCTATACC
GATGATTCTG ACATTCTCAG TATTTTGGCC CACAACGGAT TCTTCCACGA CAAGATGGAC
CTCACGCAGT GGAACCCGAA CTGGACCAGG AATGACATAA TAAAGCCATT GAACATTAAC
GTTAATGCCG ACAGTAAAGC GCCTCCTTCT GAACAAGACA GTGACGAACA TGCTGAGATC
TACGGTGATT TATCGGTAGA GTTACTCTTG TTGCCCCCTC TTCCAGAATA CCATGGCTTT
TATGCCAATG GCATTAATTC TCGATCGTGG ACCTCGGCCA ACAAACACAA TGGACTATCC
ATTGCTGTGT ACAATGTCAA ATGGGAAAGC TTCGGTGCCC ATTTGCGTAG TAGATTGATT
TCGAAGAGGT CTGCTCTGGA ATTGGCCAAG GACTCCAATG ATAACGCGAA AGTTCTAAAT
GGGAAAAGAG GATGGAGCTT TGATTACGCA TACTATAAGC AGTTGAAAAA TAAGTTTGCT
GCTCTAGACA CCGAAGCAAA AAATAGTGCT GTCGAAACTA ACGGTGGTAA GGTTGTCGCA
GCCAATCTGG TATCATAGAT GCTACTACTA AGTTTGTATA ATTTCGAAAT GATTGCTGTA
AAAATTACAT AGTTATGTCA TAGTTTCTTC ACGAACGTTA GAATAGATTT AAAAATGGTT
GCAAATATTT TGTTC
 
Protein sequence
MSADKQSLPT GTGTGSATGA GSGIRLPSIS FLSGSSGSSK LPPAANMGIS SFLNNTSAPD 
PSSQIQPKAK RVKHEQPETQ TQVQPSEDQS QAQAQLQTHS QAIAQSSQNQ YGTYSHDYNS
GYPQPEHTKT YRPIEQEPTQ TQKAQLQQTQ IQPQFQPHQN PQAQTQTQSK ASQTSSTNAT
NAPSPPAIPT ETNKQYADQD PHRHHHHHHH HHHHPHHHHH HHHSHPQPGS EQSGIPHIHS
GNHIHVLAPE SVKQEGVAKP NDDVDITNPV QHLEDTESEQ QTAAGILEAT KDVESAKSLL
PPQRALREKV EFNTVPPVSL NVQPVLQFIK EKFPQRRHLG TIVYNPTTTW SNLQTSQLYG
LKPGHVEEFD ILKERYESKS KEVCFQKKYI PSLPPLTADY INSIVEIKIP FHFIDKFIHE
FESSVIIKRE LWGGASGAYT DDSDILSILA HNGFFHDKMD LTQWNPNWTR NDIIKPLNIN
VNADSKAPPS EQDSDEHAEI YGDLSVELLL LPPLPEYHGF YANGINSRSW TSANKHNGLS
IAVYNVKWES FGAHLRSRLI SKRSASELAK DSNDNAKVLN GKRGWSFDYA YYKQLKNKFA
ALDTEAKNSA VETNGGKVVA ANSVS