| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_67695 |
|---|
| Symbol | PSP2 |
|---|
| ID | 4838504 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009044 |
|---|
| Strand | - |
|---|
| Start bp | 1642680 |
|---|
| End bp | 1645923 |
|---|
| Gene Length | 3244 bp |
|---|
| Protein Length | 818 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640389819 |
|---|
| Product | suppressor of DNA polymerase and splicing mutations |
|---|
| Protein accession | XP_001384619 |
|---|
| Protein GI | 150865413 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATAAGAGGGT AATTCCAAAC TTTACAATGG GTATGTATTC GATGAGCAGC TGGAGGTTAT
TCTGATTCCG GAAATGAAAA ACCGGTTTCG GACTCTAGGC ACAAAAGATT GTTCTCTACA
ACTGGTAATA CTAACAATAC GAACCAACAG TTCCACCAAA GAAGATGAGT TTGCAGGAGT
TCTTCAACGA CGAGTGTATG TATTTATAGC CAAGCGTTGG CCATATAATT GTGCGGACGA
TTGGACCATG ATTCCTTTTC TGGAATAATA AGACGTAGTA ATCGATGTTA AGAAAGTGCC
AAATCGTGAA ATATATTAGA AGTCAAAATT GTTCAAGAAG TTTGTTCTAA AGTCAATCCC
AATGAAGTCA TAGAGAAACC AAGAAGTTGA TTAACTATTT GGATTTGCAG TTTGCTTAGG
AATTATCTCG TTCCGGTTCT ATTGGTACTG GTATTGAATT TTATACGATT GAAGAGCTGG
TAGATAGGTT TGAGATATCC AAAAGACAAC TAAGGTAGTT GAATGAAACC AATGTGAATT
GTGGCCGATG ATGTTTGACT TGAGATTCAT TGCTGGGGAA TTCAATTTGA CTTTTGCAAA
TTTTGATAGT TGTTTTCCAT TCTGATGGGT TCGTTTTCAT TGCACTTTTC TCCATTTATT
GAATGTTTTT ACTCAATATC CATTTCTATC TGCATTTAAG ATAATGATAC TAACTACTTT
AGCGTATGGA GGCTCTTGGG CTGACGAAGA TATCGACATG GCTTCCATTT CTGTCCCCAT
CGAGAGACAT TCGCATTATA ACCAACTGTC GTATAACGAT CCGTTTGGTT CTCACCATGG
ATCCTCGCGA TCTGGTGGTG TTCCTTACGA CAATGGCCCT CCCTACATTA TAAAATTGTT
GAATTTGCCC ATCACAGCTA ATGATGGCTT TGTAGAGGAC TTGCTCCAGA GCAGATACAC
CACTTTTGTC AAGTTCAAGA TAGTTGCAGA TCCTTCTTCC AACATCTTGG AGACTCATGT
AATCAAGAAG GTAGCATTTG TAGAGCTCAG CTCGGCTGCA GACTTGCAAA AAGCTTTGAA
GTGGCATGAC TTGTACTATA AGGGAAATCG TAGGGTAGTT GTAGAGTTGG CAGATTTCAA
CGACTTTCAA CATTGTATTC AGTTTAACAC GCAACATGGT GCGGAGATTC AGCAGATACA
AGATGATTTC ATTGCTAACA AAAACCAACA ACTGCATCCT CGTCATATGG CTCTTCTTGA
CCAGATCGAC ACCTTTTCTC CCCAGCATTC CCACGCAAAC GCCTATCATC CGCCTGGGAC
CAGGAATCCT CCGAGCTTTT CTAGATCGCC TATTCGTGGA AGTGCTCAAC TTCATAGTGC
TCCGGACAAA TGGAGAAATC TTCCAGCTTT GGGGGAGTCC AAAACTCCTG CTTTAGCTCC
ATCACTGTCT GCTCCTGTAA AACATAAGGT GAGTCCTTTT GGTGAAGCTA AACCTGTCGA
TGTGCTTTCA AAACAGCAAG AGATCGAAAA GAAGTTGATA AACCTCAACA ACACCACAGT
ACAGACTTTG GGACCAGATG GTGAAATTTC TGATGTAGAA GATGTAGTGA GACAGTTCCA
CGAAAATGCT TCCCCCAAGT TGAGAAGAAG CTCATTGGGA CGTAGAACTT CCACCACAAG
CACTGATGGA GGAAGAAGGT CTTCTATATC CATCTTGAAA CGCCCGCCTA TACCGCACGA
CGACGTTCAT GAAGCTAGCC CGGATATTGC CCCTAAGACG GCCATTCCAA CTCCAGCACA
AGCTCCAACT CATAGTAGTG AATTGAACAA GGCTGGAACG CCGAAACTCT CTCCTGCTCC
AATACCACCT TCTGCATATC CTTCCAATGG AGTAGGTAAG AGTCTTGCTG AGTTGCTTAG
AGAGCCCAAT GACGACCTAG CTTCCATTTC TAGTGGAGGT CGCAGAACAC CTACAACTAA
GAATTCCACA CCGAAACCGG CTGTGGTAAA ACCGGTAATA CTTAAGAAGA AAGTCACTTC
CAGCCCCTTG ATCCCCAAGG TAGATTTGAC GTTAAAAGAG AGCGAGTTCC TAGCACAGGG
AGAGAACAAG AAGCAGACTC CCCTTCAACT TCAGGCTGAC CATGCGAAGG AAATCGAAAT
CGAAGATAAG TTGAAGAAAA TTAATGATAC TTTATCGAAG ACGAATTTGG CAGTGGAAAA
GAAAGATGTT GCTGAGATCG TAACGTCTAC TGCATCTAAT TCTGTAGCCA AAGAAGAACC
CGAAGCACAG CATGAAATTA AAGCAGAAAA TCTGGTCGAG GAGCGCCCAG ATTTCAAGAA
AGAACTCAGT GATATAGTCA AGAAGTCACA TGTCAGAGAT CTGCGTAAAC AACCTCATTC
TTCGACATAT CGTGAAGGCC CTCGTTTCCA GCCTAACACC AGTAGGAGGT TCAACAACTC
TACCAATGGT CACCAGAGAA GTTTTGGTGA CAGAAACGTG GAAGGCGTAG CTAGTCATCC
TATAACAGCT TCAACTTCTG GCAAGTTGAA TAATGCTGAA GACTCTGTTT CTGCTGGGGG
CAGAAACTTT CGACAACCTC GTTCACAGAA CACTTATGAC AGATTCAGAT CAAGGTCTCC
CACAAAAAAC AAAGGCAGAG TATTAGGAAA TAAGCGAGAA TCAGTTTCGC CTAGCAACGC
TGAGAAAAAT GCCGAAAAAT CAACGATATC AACATCTACG TCAACGCCAG CTTCAACTCC
ATCTGCTGCA AATGGCACCA ATGGCAGCCA CGGGAATTCA AAGAAGGAGG AAGTCGTAAA
CTCGAGTTCT ACCGGTTCTG GGGTAACTCC AGAAATTCAG AAGAGTAGCG AGTCTGTAGA
GTCTGCTTCT AGTACTACAG CTACTGCTGG ATCTTCTGCT TCTGCTACAT CAGAGAATGA
TGACACATCA AGTTCGACTT CTTTTAGAGG AGGTCATGGA CGAGGTAGAG GTAGGGGTCG
TGGCAGAGGC ACTTCTTCGA GAGGAAGAGG ATCACGAGGG GGACGAGGCG GTGCAAGAGG
AAACTTCAAT CTTCATTACG TTCGTAGCAA ACCTTCGGAT GAATCATCTG CTAAAGGCAA
TGATGCTTAG TTTCACTTGT AATGATGTCA AGATCCTATC ATACAGTAGC TTTCTTGGTG
AGCATGTGTA GGTTTATACT GATCATAGAT AGCGTTCACG ATAAATAATG TATTTATAGC
TGAT
|
|---|
| Protein sequence | MVPPKKMSLQ EFFNDESYGG SWADEDIDMA SISVPIERHS HYNQSSYNDP FGSHHGSSRS
GGVPYDNGPP YIIKLLNLPI TANDGFVEDL LQSRYTTFVK FKIVADPSSN ILETHVIKKV
AFVELSSAAD LQKALKWHDL YYKGNRRVVV ELADFNDFQH CIQFNTQHGA EIQQIQDDFI
ANKNQQSHPR HMALLDQIDT FSPQHSHANA YHPPGTRNPP SFSRSPIRGS AQLHSAPDKW
RNLPALGESK TPALAPSSSA PVKHKVSPFG EAKPVDVLSK QQEIEKKLIN LNNTTVQTLG
PDGEISDVED VVRQFHENAS PKLRRSSLGR RTSTTSTDGG RRSSISILKR PPIPHDDVHE
ASPDIAPKTA IPTPAQAPTH SSELNKAGTP KLSPAPIPPS AYPSNGVGKS LAELLREPND
DLASISSGGR RTPTTKNSTP KPAVVKPVIL KKKVTSSPLI PKVDLTLKES EFLAQGENKK
QTPLQLQADH AKEIEIEDKL KKINDTLSKT NLAVEKKDVA EIVTSTASNS VAKEEPEAQH
EIKAENSVEE RPDFKKELSD IVKKSHVRDS RKQPHSSTYR EGPRFQPNTS RRFNNSTNGH
QRSFGDRNVE GVASHPITAS TSGKLNNAED SVSAGGRNFR QPRSQNTYDR FRSRSPTKNK
GRVLGNKRES VSPSNAEKNA EKSTISTSTS TPASTPSAAN GTNGSHGNSK KEEVVNSSST
GSGVTPEIQK SSESVESASS TTATAGSSAS ATSENDDTSS STSFRGGHGR GRGRGRGRGT
SSRGRGSRGG RGGARGNFNL HYVRSKPSDE SSAKGNDA
|
|---|
| |