Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_67615 |
Symbol | |
ID | 4838933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | + |
Start bp | 1159236 |
End bp | 1161353 |
Gene Length | 2118 bp |
Protein Length | 705 aa |
Translation table | 12 |
GC content | 44% |
IMG OID | 640390248 |
Product | predicted protein |
Protein accession | XP_001384174 |
Protein GI | 150865097 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1346] Putative effector of murein hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCTTA CAGATGTTTC GGATTCGATA TCGGTGGTAG TGACCGAGAC ATCTCAGTCT TCAGCAGTCT TTCAGAGACA AGATCCCTCG TTTGATTCCG GAATAGCGCC AGTATACGAG GATGTAGAAG ATCAAAAAGA TACAGAAACT TCCTTCTGGT ACAACCTCAA ACTCTCGGAC ATCACCCGTG GAGTAATATA CGGGATTTAT TACTCACGGC AGCATTTATT CCACTCATAC TTTATCATTC CTCTTGGGAT CATTGTACTA TTCGCAGTAT TGTACGGTTT GAACCAGATC CTAGCCAACG TAATCCGGAT TCGGTTTCCA GCCTCAGTAT TGGGCATGTT GATTAATCTT GTAGTGTTAG TTGTTCTCAA CTTGGTAGCA AACATTAGAC TGAACCATCC GGAAAAAGGA GGTGTTCTCA CTAGCATCAG CAAGGGTTCT GCTTGGCTCT TGACAAACTA TTTGACAATA ACGAAACCGC CCATGAACTT CTCGTTGAAG TGGATCAACG TTTTCTTCAT TCCCTCGTTT ATCATCTTGC CTCTTTCTGA CCCTATCACG TTCATGGAGT GTCTCAAGAT CGCTGGTGTG TTTGTTTTTG GTTTTCTACT TTTGTTTTGT GTGGACGTCT ATGCCATCAT TGGCTTGAAA TGGACACTTA ACCATTTTGG AATCTTCCGC GACGACACGA AAGTATCCGA GGCCACAAAC TCAGACGATG AAACCAACAA CGACGAAGAG AGTGAAAATG AGGATATTGA GTTAGAAATT ATTCCTTCTA GAGGTTTCAA TTCTCATATG AGAGACGATA TCACCACTAT TGATATCCAG AGCTTGCATC CTACGCGAAC TGAGCCTAGT AACAATGTTA TTCGTCATAG CTCAGTATCC GAAAACCCAT TCGACGGAGG AAATGTCTCT ACATTGAGCG AGTTGACTCC AGAAAACCTC ATTCATCCTG CTCCCATACA TCAAAGAGCT CACAGCATTG CAACACCAGA CCCGCATTTG CAATTACGTT CCCCAGATTC GGCTCCTACC ATTATGGTTT CACCGGAAAG CGAAGACGAA ATTGAATTTG ATAGAAACAG TGCACGGCTG TCATCAGATA CAGTTGCTTC TTCTGAGATT TTCTCTCCCA AGCTCAGTGA AAAGTCGAAA AAAATTGTAG TCTTCATCAC TTCGTATTTC GATTGGATAT TGTATTGTGT TCTCTTTGTT GTTTCGCTTC CCTTATACTA CATTTCGTCA CTACATGTGT TCTTGCCGTA TCATTTGGGT ATCACTATCT TGGCTTACTA TATAGCTTTG CTCATTCCTC AAAAATGGCC CTCCACCAAA AAGTTCGCTC ATCCCATCTT GATCCTGACG CTTGAAATCC TTTTCGTGTG TTTCATAGGC TCTCTCATCT ACCATAGAGG TGAACTCAAA GGATTTCTCG ATGACTTGCG CTTCTATAAG ACTGGCAAAA ATTACTTAAA CTTGTTCAAC AACCAAATCA TGCTTGACAA TGGGCAACAG TCTTCAATAC CAGACGATAA CTTCACAGCC ACACCCATCT GGCCCGGTTG CGGCGATGTC CTCAGTTCTC TCATGGATAT CTCCATTGTC TCGTTATCTT TGCCAATGTT CACGCATAGA AAGGACTTCG TTCGCAACTT CTGGGTCTTG ATGCCCCCTA TACTTTTATC AGTTGCGCTT ACGTTTTTCA TTTACCCCGT AGTCAGCTTC AATATCGGCA TCGAGTCGGA GCGGTCGATA GGGTTCATAG GCCGTTCCGT TACTCTTGCA CTCGGCACGC CGTTGATAGA GGGACTCGGA GGTTCAGTAT CGCTCATGGC TGTTTGCACT ATTCTCAGTG GAATCTGTGG GGTGCTTATC GGAGATACTC TTTTCGACTT ATTGCGCGTC GCCAAAAACG ATTACGTCAC ACGAGGTGTA AGTCTTGGAA TAAATTGTGG AGCTATTGCT ACAGCCCATT TGCTCAACGT AGACCCAAGA GCAGCCTCCA TGAGCTCATT GAGCTTCAGC GTTTTTGGCA CTGTCATGGT CGTCATGGCC AGCGTGGGTG CTGTCAGAGA CATGATCCGG AGCTGGGTAG GACTATAG
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Protein sequence | MSLTDVSDSI SVVVTETSQS SAVFQRQDPS FDSGIAPVYE DVEDQKDTET SFWYNLKLSD ITRGVIYGIY YSRQHLFHSY FIIPLGIIVL FAVLYGLNQI LANVIRIRFP ASVLGMLINL VVLVVLNLVA NIRSNHPEKG GVLTSISKGS AWLLTNYLTI TKPPMNFSLK WINVFFIPSF IILPLSDPIT FMECLKIAGV FVFGFLLLFC VDVYAIIGLK WTLNHFGIFR DDTKVSEATN SDDETNNDEE SENEDIELEI IPSRGFNSHM RDDITTIDIQ SLHPTRTEPS NNVIRHSSVS ENPFDGGNVS TLSELTPENL IHPAPIHQRA HSIATPDPHL QLRSPDSAPT IMVSPESEDE IEFDRNSARS SSDTVASSEI FSPKLSEKSK KIVVFITSYF DWILYCVLFV VSLPLYYISS LHVFLPYHLG ITILAYYIAL LIPQKWPSTK KFAHPILIST LEILFVCFIG SLIYHRGELK GFLDDLRFYK TGKNYLNLFN NQIMLDNGQQ SSIPDDNFTA TPIWPGCGDV LSSLMDISIV SLSLPMFTHR KDFVRNFWVL MPPILLSVAL TFFIYPVVSF NIGIESERSI GFIGRSVTLA LGTPLIEGLG GSVSLMAVCT ILSGICGVLI GDTLFDLLRV AKNDYVTRGV SLGINCGAIA TAHLLNVDPR AASMSSLSFS VFGTVMVVMA SVGAVRDMIR SWVGL
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