Gene PICST_67434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_67434 
Symbol 
ID4837760 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp1760663 
End bp1761911 
Gene Length1249 bp 
Protein Length201 aa 
Translation table12 
GC content43% 
IMG OID640389075 
Productpredicted protein 
Protein accessionXP_001383621 
Protein GI150864686 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.812011 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCCAA AGTCCAAGAC CGCCGCCGCC GCTGCCGCCG CCCCATCCAA AATCACCTAC 
AAGGGTAAGT AGTTCAACTG CTCCGATATT CCCCATCTGT TTGTCCCCTC TCTGGCTAGT
TGCCGAGCTG GATTTTCACA CAACCAAAAT TAGGATTCCT ACATTAATGT AATGGATCGT
ATAAGAGATC GACATACTAA CTATGCTTTA GACATGATCA AGTCTGCTAT CGTCACCTTG
AAGGAAAGAA ACGGATCTTC GTATGTGTCT CCTATTATTT CCAGATTTAG GGAGTGAGGT
CATTCGCCAA AAGATATGCC TGCCTGGACT GTGACATTTT GTTCAGTAGA AACAGCAAAT
CAACCATTTG ATTGGCCTAA TACTGTACCA AACATATGCA ACAGACAATC GCAGCAATTG
TCCGCAATTG CCGTTGTCAG GCTGTTGCTA ACTGTTTTCA AGGGGCAGTT CGCATCGCAC
CACACTCAGA ATAGCATCTC ACTTTGTGCA ATACTAACCA TTTCTAGCCG TCAAGCCTTG
AAGAAGTACG TCCAATCTAA CAACGACACC AAGACTGCCA ACTTCGATGC CTTGTTCAAC
GCTGCTTTGA GAAAGGGTGT CGAGTCAGGT GACTTCTTGC AACCAAAGGG TCCATCTGGT
CCAGTCAAGC TTGCCAAGAA GGAAAAGCCT GTCGTTCCAA AGGTTACCAA GAAGGCTCCA
GTCAAGAAGG AAAAGCCTGC TGCTCCAAAG AAGGCTGCTC CTAAGAAGGC TGCTCCAAAG
AAGGTTGTCA AGAAGACAGC TGCCAAGAAG GCTGCCCCAA AGAAGGCTGC TCCTAAGAAG
GCTGCTCCAA AGAAGGCCGC TACCAAGAAG GCAGCTCCAA AGAAGGGTTC CAAGTAAATA
AGTTGTTGAC AAGACTTGAT TTCCTGTTTG TATATTAGTG CTGGGCATAA AAAAAGCAGT
TCAAAACTTA TACTTTTCCT TCTTTATCGT ACACCATTTG ATGGTGTTTT CTTCTTTACC
ACCAAGCTAG AGTTGCTTGC TTGTTTCTAC GTGTGTGCTG TTGTCTATTA TTGTTTTATT
AATACCTACT ACTGTCGACA AAGACTAATT GTTCTATTTT TGTGCCTGTC TCCTTCTCTG
TATCTCTTTC CACAGTTGTT TATACTATTA TGTATTATTG TTATTATATA GCTGTTGGTG
GATTTTTCAG TAAGTGTGTA TTTTTAGTAA ATGAATAGTT AGTTTTTGC
 
Protein sequence
MAPKSKTAAA AAAAPSKITY KDMIKSAIVT LKERNGSSQS QQLSAIAVVR SLLTVFKGQF 
ASHHTQNSIS LCAILTISSR QALKKYVQSN NDTKTANFDA LFNAALRKGV ESGDFLQPKG
PSGPVKLAKK EKPVVPKVTK KAPVKKEKPA APKKAAPKKA APKKVVKKTA AKKAAPKKAA
PKKAAPKKAA TKKAAPKKGS K