Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_67334 |
Symbol | CCW12 |
ID | 4837979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 1042737 |
End bp | 1043803 |
Gene Length | 1067 bp |
Protein Length | 281 aa |
Translation table | 12 |
GC content | 48% |
IMG OID | 640389294 |
Product | cell wall protein |
Protein accession | XP_001383488 |
Protein GI | 126133927 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.151848 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CTTAAAGTTA CTTCCAACTA CATACACTCT TTCAATCACT CACCATGCAA TACAAAGTCT TAGCTGTCTC CGCTGCCTTA GCTGCCTCTG CCTCTGCTGC TTCCACCATC ACCCAGGTTG AAACCGTCAC TGAACACCAC ACCACTGAGG TTACCATTAC CTCTTGTGAA GAAGAAAAGT GTGTCACTAC CGTCGCCACC TCTTCTTTAA CTGTTCTCAC TGAGACTGTC AATGGTGTTG AAACCATCTA CACCACCGTC TGTCCTTTGA CCGAGTCTTC TACTTCCGTT GAAGCTGAAT CCACTCCAGT CTCCAACACT GTTGTCACTA CCACCGTCAA CGGTGTTGAA ACTATCTACA CCACTATCTG TCCTTTGACT GAAACCACCC CAGAAACTGT CGCTCCAGAG GCTTCTACTC CAGAGCTTAC CACCAAGGTT GTCACCGAAA CTGTCAGCGG TGTTGAAACT ATCTACACTA CTACCTGTCC AGTGTCTGAA GAAGCCTCTA CTTCTCTTGA AGCTGTTGAA ACTACACCAG CTGCTGCTCC AGCTGTTGAA ACTACTCCAG CCGCCGCTCC AGCCGTTGAA ACCACTCCAG CTGCTGCTGC TCCTGAAGTT GAAACCACCC CAGCCGCTGC TGCTCCTGAA GTTGAAACCA CTCCAGCTGC TGTTGCTGCT TCTGAAGAAG TCACTTATGT TGACCTCACC ACTACCCCTG TCGTCACTGC CTCCACCGGT GTTGACGAAA CCCTCACTGA ACAATACACC TTGACCTCTT ACTACCAACC TGCCAACTCT ACTGCTGCTG TTGCCACTTA CGAAGGTAAC GCTAACAAGT TGGTTGCTGG TGCTGCTGGT ATCGCTGGTA TTGCCGCCTT GTTGTTGTAA GCAGCTTCAT TTGCATTTCT TCATGTTATA TGAAATATCT GGGCCTTAGA GCTTAGTGAG CTAAACTGCG GACAATAGAT TTTTTCGCAG CCATGCAACT CTGCAGCCTC TGCGCATTTT CAAAAGCAAT ATTCTGTACT TTATATAATT GGGTTTTCGG TAATATATTT AATTAGT
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Protein sequence | MQYKVLAVSA ALAASASAAS TITQVETVTE HHTTEVTITS CEEEKCVTTV ATSSLTVLTE TVNGVETIYT TVCPLTESST SVEAESTPVS NTVVTTTVNG VETIYTTICP LTETTPETVA PEASTPELTT KVVTETVSGV ETIYTTTCPV SEEASTSLEA VETTPAAAPA VETTPAAAPA VETTPAAAAP EVETTPAAAA PEVETTPAAV AASEEVTYVD LTTTPVVTAS TGVDETLTEQ YTLTSYYQPA NSTAAVATYE GNANKLVAGA AGIAGIAALL L
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