Gene PICST_67334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_67334 
SymbolCCW12 
ID4837979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp1042737 
End bp1043803 
Gene Length1067 bp 
Protein Length281 aa 
Translation table12 
GC content48% 
IMG OID640389294 
Productcell wall protein 
Protein accessionXP_001383488 
Protein GI126133927 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.151848 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CTTAAAGTTA CTTCCAACTA CATACACTCT TTCAATCACT CACCATGCAA TACAAAGTCT 
TAGCTGTCTC CGCTGCCTTA GCTGCCTCTG CCTCTGCTGC TTCCACCATC ACCCAGGTTG
AAACCGTCAC TGAACACCAC ACCACTGAGG TTACCATTAC CTCTTGTGAA GAAGAAAAGT
GTGTCACTAC CGTCGCCACC TCTTCTTTAA CTGTTCTCAC TGAGACTGTC AATGGTGTTG
AAACCATCTA CACCACCGTC TGTCCTTTGA CCGAGTCTTC TACTTCCGTT GAAGCTGAAT
CCACTCCAGT CTCCAACACT GTTGTCACTA CCACCGTCAA CGGTGTTGAA ACTATCTACA
CCACTATCTG TCCTTTGACT GAAACCACCC CAGAAACTGT CGCTCCAGAG GCTTCTACTC
CAGAGCTTAC CACCAAGGTT GTCACCGAAA CTGTCAGCGG TGTTGAAACT ATCTACACTA
CTACCTGTCC AGTGTCTGAA GAAGCCTCTA CTTCTCTTGA AGCTGTTGAA ACTACACCAG
CTGCTGCTCC AGCTGTTGAA ACTACTCCAG CCGCCGCTCC AGCCGTTGAA ACCACTCCAG
CTGCTGCTGC TCCTGAAGTT GAAACCACCC CAGCCGCTGC TGCTCCTGAA GTTGAAACCA
CTCCAGCTGC TGTTGCTGCT TCTGAAGAAG TCACTTATGT TGACCTCACC ACTACCCCTG
TCGTCACTGC CTCCACCGGT GTTGACGAAA CCCTCACTGA ACAATACACC TTGACCTCTT
ACTACCAACC TGCCAACTCT ACTGCTGCTG TTGCCACTTA CGAAGGTAAC GCTAACAAGT
TGGTTGCTGG TGCTGCTGGT ATCGCTGGTA TTGCCGCCTT GTTGTTGTAA GCAGCTTCAT
TTGCATTTCT TCATGTTATA TGAAATATCT GGGCCTTAGA GCTTAGTGAG CTAAACTGCG
GACAATAGAT TTTTTCGCAG CCATGCAACT CTGCAGCCTC TGCGCATTTT CAAAAGCAAT
ATTCTGTACT TTATATAATT GGGTTTTCGG TAATATATTT AATTAGT
 
Protein sequence
MQYKVLAVSA ALAASASAAS TITQVETVTE HHTTEVTITS CEEEKCVTTV ATSSLTVLTE 
TVNGVETIYT TVCPLTESST SVEAESTPVS NTVVTTTVNG VETIYTTICP LTETTPETVA
PEASTPELTT KVVTETVSGV ETIYTTTCPV SEEASTSLEA VETTPAAAPA VETTPAAAPA
VETTPAAAAP EVETTPAAAA PEVETTPAAV AASEEVTYVD LTTTPVVTAS TGVDETLTEQ
YTLTSYYQPA NSTAAVATYE GNANKLVAGA AGIAGIAALL L