| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_67181 |
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| Symbol | AIP1 |
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| ID | 4837682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | - |
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| Start bp | 30458 |
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| End bp | 32413 |
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| Gene Length | 1956 bp |
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| Protein Length | 617 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640388997 |
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| Product | actin cortical patch |
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| Protein accession | XP_001383647 |
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| Protein GI | 150864708 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAATCG CGCCACTAGC ACTCTACCCA CCCAATCCGT CCACAACTAG AGCTCAATCA
GTTCATATTT CCTACGATGA GGTCAACGAT CGTATTGCCT ACCCAACGGG TAAGTCTGTG
TTCATCAGAA GTGTGGATCC AGAATCATCT TTGAAGCCCA AGCAATTCTC TAAACATATC
CACACTACAA CAGCTGTCGC ATTTGCTCCT TCTGGTAACT ACGTGGCATC TGCTGATGAG
TCTGGAGCGT TGAAGATCTG GGACTCGTCT GTTATCGGCG AAGATAGCAA CACAATCAGC
TTCGAACAAC CAACCATCAA GAGTGAATTC CAGATTCTTT CGGGCCCCAT CAAGTCAATA
GCCTGGGATT CTGACAGTTC GCGTGTTATT GCAGTTGGGC AGGGTAAGGA TAAATTTGGT
CACTGTTTCT CATGGGATTC CGGCAATTCA ATCGGTGAGA TCCAGGGCCA TTCGGCCACT
GTCAATGCTG TCGACATCAA GCCTCAGAGA CCATACAGAG CTGCAACAGT TGGTGAAGAT
AAGGCGTTAG TATTCTATAA CGGTCCACCT TTCAAATTCG ACAAGAGTAT CCGTGGTCAC
CATACCAATT CTATCAAGGC CGTCAAGTTC TCGCCTGATG GAAAGTGGCT CGTAAGTGTA
GGTTCCGATA GAGCAATTGT GGTATATGAT GGGAAGTCTG GCGAGTACAT TAAGAAGTTG
GAAAATGCCC ACGAAGGTGG TATCTACTCT ATCTCGTGGT TTAAAGACTC GCTGAAATTT
GTCACTGCTT CGGCTGACAA CTCCATTAAG CAATGGAACA TAGACTCATT AGAATCTACA
GCTGAGTATA GATTCACTTC ATCTAGCTCT ATAGACAATC AGCAAGTTGG AGTCGTAGTT
ACCAAGGCTT ACATCATCTC ACTATCGCTT AACGGAAATC TCAACTACTT TAAGGAAGGT
GAATCTAAAC CATTTGCTGT CATTCCTGGC CAAAAGTCGC CTTTGACTTC AGTTTCGTTG
AACGGTCAAA CCTTGTATAC TGGAGCTTCT GAGGGTCCCA TTTTAAAATG GACTATCGAA
TCTGAGAGAA TCAAGACCAT CCCTGATAGA CTTGGGGAAC ATTCAAACTA TGTAGTAGGC
ATATTGACAG AAGACTCCTA TGTTGTCAGT GCAGGCTGGG ACGATAAGTT GAACCTTTGG
AGGGGGGACA AATTATCCAA ATCTGTCTCT TTGAAGGGAC AACCCAAGCA AATAGGTGTA
CTTCCGAAAT TGATCGTAGT GTTGCTCGAG TCATCTGTGG AGATTTATAC AGAGGAATTG
GAAAAGAAAA TTGAGTACGA CTTGGGGTTT GAAGCTACAG GGTTTGCCGC GAAGGAAGAC
TTGTTACTAG TTACAAATGT AAAGACCAAT TCTGTTGAAG TGCTTTCTAT AGACGGAGAG
AGTATTATCA AATCAAACTT GAAATTCCCC CCACTCCGTT CTCCTCCAAG CCTTATTCGT
ATTTCTCCTG ATGGAAAATT CGTGGCTGTT GCAGACTTGA CAGGAAAGTA TACATTATAT
GATACAAAAA GTGCCTCTGT TGTCACTACA CGTTGGGCAT TCCATTCTAG TAAGGTAAAT
GATGCCAAGT GGACTCCAGA TTCCCAATTC ATCATTAGTG GTGGGTTGGA CACCGGCTTG
TTTTTATACT CCGTAAAGAA GCCTTCTAAG GTCTTGAAGT TTCCATTGGC ACACCAAATT
GGTATTTCAG GTGTGGAATG GTTGAGCTAC GACGGAAATA AGGGTCTGTT TGTTACAATC
GGTTTGGATG GTGTCTTGAA AGTCTGGAAC GTGGATTTCA GTGTTTATCT TTAGATTTGT
CGTTGACTTA CAATGGACTT GCTTAAGGGC TCTCAGAGAT GTAAGCTTGC AATGTGTTTA
GAATCGAGTA TAGAATAAAG ATCATAGAAC ATGACA
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| Protein sequence | MSIAPLALYP PNPSTTRAQS VHISYDEVND RIAYPTGKSV FIRSVDPESS LKPKQFSKHI
HTTTAVAFAP SGNYVASADE SGALKIWDSS VIGEDSNTIS FEQPTIKSEF QILSGPIKSI
AWDSDSSRVI AVGQGKDKFG HCFSWDSGNS IGEIQGHSAT VNAVDIKPQR PYRAATVGED
KALVFYNGPP FKFDKSIRGH HTNSIKAVKF SPDGKWLVSV GSDRAIVVYD GKSGEYIKKL
ENAHEGGIYS ISWFKDSSKF VTASADNSIK QWNIDSLEST AEYRFTSSSS IDNQQVGVVV
TKAYIISLSL NGNLNYFKEG ESKPFAVIPG QKSPLTSVSL NGQTLYTGAS EGPILKWTIE
SERIKTIPDR LGEHSNYVVG ILTEDSYVVS AGWDDKLNLW RGDKLSKSVS LKGQPKQIGV
LPKLIVVLLE SSVEIYTEEL EKKIEYDLGF EATGFAAKED LLLVTNVKTN SVEVLSIDGE
SIIKSNLKFP PLRSPPSLIR ISPDGKFVAV ADLTGKYTLY DTKSASVVTT RWAFHSSKVN
DAKWTPDSQF IISGGLDTGL FLYSVKKPSK VLKFPLAHQI GISGVEWLSY DGNKGSFVTI
GLDGVLKVWN VDFSVYL
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