| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_66824 |
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| Symbol | STP4 |
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| ID | 4836658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 463256 |
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| End bp | 464727 |
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| Gene Length | 1472 bp |
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| Protein Length | 363 aa |
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| Translation table | 12 |
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| GC content | 50% |
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| IMG OID | 640387973 |
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| Product | tRNA splicing, uptake of branched- chain amino acids |
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| Protein accession | XP_001382325 |
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| Protein GI | 150863751 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.446888 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.123959 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CATACCCTCC CATTTGGCGA CCCTTTTTGC TGTGAACCCC TACTTGCCTT CACGTCTTTT
CCTTGTCCAT AGTCCGACCT TATACTTAGT GCCCCTCCTA GTACTGGCTC CTCGCACTAG
CCGCCAGAAA AACTCCCGCT GCCGCCAGAA ATAAAGCTAC CGCGCCAGCG ACCTACCGAG
ACTTCGACCC TCAGCATTAT ACAATAACTT CCACACAATA TAGACACTGT AGCTATAGCC
ACTAGACCGA TATCTTGCTA TTACTGTACT CTATATACTC CATCCTCCTA TACCACCAAA
GCAACTGCTA ACATTTAATT GCGTCAATTA GAGCATACTT CGCTAGCACT TATCTCAACT
TTCCACAACT TTATGCCATT ATGAACTCCG CCTCATATTC CTACGCCATA GCCAACCAGC
ACAGTCCCCG CGACTCAGCC CAAACAAAAT TGCCCTCAAT CCATCTGCTT CTGTTGGATA
TACCCAGCTA CCAGAATGCA GCAGGACCTG TCCCGGCTCA GACGCCCATG TATAGTCTCC
CACCGATATC GTCTACGCCT ATGACTCTCC CTGCGCTCCA GGTGTCTCCC GCTAGATCGG
CATACTTTCC TCAGCCGCAC CGCGGCGGAA GCGTGCTTCT TCCCTCGCCG GCCAGTTCTG
TCGCTGGTAC AAACTACCCA CATACCACCT ACAGTCATAG CCAGAACCAT AGCAACTCCG
GCAGCAGCGT TGTACAGCTT CTGCCATCAT ACACTTCATC TACATCTTCG TCACGGTTGC
TCAGTCCGGT GAACTCTCCA TATTCTTCGG CTTCTTCCAT AGACGGCCTC AACCGCACCA
GATCATCTTC TGACCCCATT ATCAAAGACT CTACCCCCAC TACCGAGCTC GCAAGGCCAT
TTCAGCTGGT GACACCGCCA CTAGTAAAAG AAGAAGAGTC TTCGGACGAA GTGCTAACGG
AACTGGACTC ACCACCAACC AAGAAGAACT GGAAGCCCCG TAAGAAGAGA CAATGTCCCG
AATGCAAATT GTATTTTTCC AATCTTGCTA CACACAAATC TACACACTTA AAGCCAACAC
TGAGACCCCA TATCTGTAAA TATTGCAACC GTGGCTTTGC CCGGCCCAAC GACTTGTTTA
GACACGTCAA GTGCCACTGG AAGGAAATCG GCAGTGACCA GGGCCAGTTT AAATGCCCCT
TCAAGAACAC AGCAGTTTCT GGAGATGATA GTTCTGCCAC GGACCACTGC TGTCACAACA
CCGGTATCTT TTCTCGGTGC GACACATTCA AAAACCACTT GAAGGCCATC CACTTCCAGT
ACCCTAACGG AACCAAAAAG GACCAGAGAA TGAAGGTTTC GGGCAAGTGT AGAATGTGCC
AAGGAGAGTT TAAGAACGTA GAAGATTGGA TAACCAACCA CATCGAACGG AACGGCTGCC
CTTATGCCCT CAATGTCATC AAAAAAGAAT AG
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| Protein sequence | MNSASYSYAI ANQHSPRDSA QTKLPSIHSL SLDIPSYQNA AGPVPAQTPM YSLPPISSTP
MTLPALQVSP ARSAYFPQPH RGGSVLLPSP ASSVAGTNYP HTTYSHSQNH SNSGSSVVQL
SPSYTSSTSS SRLLSPVNSP YSSASSIDGL NRTRSSSDPI IKDSTPTTEL ARPFQSVTPP
LVKEEESSDE VLTESDSPPT KKNWKPRKKR QCPECKLYFS NLATHKSTHL KPTSRPHICK
YCNRGFARPN DLFRHVKCHW KEIGSDQGQF KCPFKNTAVS GDDSSATDHC CHNTGIFSRC
DTFKNHLKAI HFQYPNGTKK DQRMKVSGKC RMCQGEFKNV EDWITNHIER NGCPYALNVI
KKE
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