Gene PICST_66810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_66810 
Symbol 
ID4836719 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp399383 
End bp400190 
Gene Length808 bp 
Protein Length214 aa 
Translation table12 
GC content52% 
IMG OID640388034 
Productpredicted protein 
Protein accessionXP_001382838 
Protein GI150864132 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCGG AGTTTTCAGG CTGGAACGAT AAGGAAGACA GCGCCGCTGG TTCGGAAGTG 
AAGTTTGATC CTTCGTTCGA AAGACATGAC CAGCAAGCAG CCAACGACGA CTATCCCAGT
GTCGAAGACG TGACGGCAGC AGCAGTGGCC AATGCGCAGC AACACCATCA CCAGGATGGA
GGGAACAGAG CAGACGGTTC GGGCTCCGGT CGTCCCAGCC ATGAAGAGCT GGTGAGAGCT
GCTCACGAGG CCGTCGCAGC AGCAGCAGCT GTTTCACGTC TAGGAGAGCA ACAGCAGAAT
GCAGTGGGTG GAGTCGTCGG AGGAAGTGTA GCAGGCAACC TGGGGGTGGG TAGCAGTAGT
GCTGCCGATT TAGCCAGTAA GTACCACCGT GTAGAGCGTG TGGTCTCCAA CACGAAAAGA
GCTGCGCAAA ACAGAAGTGC ACAACGAGCC TTCAGACAGC GCAAACAGAA GTATATCACG
GAGTTGGAGT CCAAAGCCGC AGAGACAGAC ACCTTGCGTC TGGAGCTTGA ACGATTGCGC
GAAGAAAACA TGCAATTGAG AGACTATACC TTAGTCTTGC AGAGCAGGGT GATTGAGTTG
TCTGGTGGAG CCCATGCCAT AGGGAGCGGG CCCGACGCTG GAGGCATCCC AGCACCGCCC
GTGTTTAGCA AGTACACATC AGAGAAGTGA ACATATGACG ATCAGAATGA AGATATTATA
AGGTGATAAT GAACAGATGA TGAACAGACA TTAGGCAAAA ACGACTGCGA AATGAAAATC
ACCATTCAGC ACAACATTGA AAGAAGTT
 
Protein sequence
MNAEFSGWND KEDSAAGSEV KFDPSFERHD QQAANDDYPS VEDVTAAAVA NAQQHHHQDG 
GNRADGSGSG RPSHEESVRA AHEAVAAAAA VSRLGEQQQN AVGGVVGGSV AGNSGVGSSS
AADLATAQNR SAQRAFRQRK QKYITELESK AAETDTLRSE LERLREENMQ LRDYTLVLQS
RVIELSGGAH AIGSGPDAGG IPAPPVFSKY TSEK